RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 SIPA1L1O43166 1804 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 MAGEA10P43363 369 aaPredicted RBP9.47□□□□□ -0.89
VMP1-204ENST00000587259 ATP8B2P98198 1209 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 Q3C1V9 767 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 C8orf34Q49A92 452 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 BMP2KLQ5H9B9 411 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 SPTY2D1Q68D10 685 aaPredicted RBP9.47□□□□□ -0.89
VMP1-204ENST00000587259 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
VMP1-204ENST00000587259 AATFQ9NY61 560 aaKnown RBP eCLIP9.47□□□□□ -0.89
VMP1-204ENST00000587259 SAP30BPQ9UHR5 308 aaKnown RBP9.47□□□□□ -0.89
VMP1-204ENST00000587259 PNMA3Q9UL41 463 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 PFASO15067 1338 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
VMP1-204ENST00000587259 LOC285556D6RIA3 1793 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 ATAD5Q96QE3 1844 aa9.47□□□□□ -0.89
VMP1-204ENST00000587259 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 TBC1D12O60347 775 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 CCND3P30281 292 aaPredicted RBP9.46□□□□□ -0.9
VMP1-204ENST00000587259 MTX1Q13505 466 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 ZYXQ15942 572 aaKnown RBP9.46□□□□□ -0.9
VMP1-204ENST00000587259 GORABQ5T7V8 394 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 DEFB123Q8N688 67 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 PAGR1Q9BTK6 254 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 LNPKQ9C0E8 428 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 PORCNQ9H237 461 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 C11orf49Q9H6J7 331 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 HMX1Q9NP08 348 aaPredicted RBP9.46□□□□□ -0.9
VMP1-204ENST00000587259 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
VMP1-204ENST00000587259 PALD1Q9ULE6 856 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 RPTORQ8N122 1335 aa9.46□□□□□ -0.9
VMP1-204ENST00000587259 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 GCLCP48506 637 aaPredicted RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 DYNLL1P63167 89 aaKnown RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 IRX3P78415 501 aaPredicted RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 LRRC26Q2I0M4 334 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 ERC1Q8IUD2 1116 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 SSH3Q8TE77 659 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 LRRCC1Q9C099 1032 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 LRP2BPQ9P2M1 347 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 RBPJLQ9UBG7 517 aa9.45□□□□□ -0.9
VMP1-204ENST00000587259 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
VMP1-204ENST00000587259 A0A1W2PPC1 479 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 BACE1P56817 501 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 HERVK_113P62684 666 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 CASC1Q6TDU7 716 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 FAM161BQ96MY7 647 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 DBNDD2Q9BQY9 259 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 UBE2OQ9C0C9 1292 aaKnown RBP9.44□□□□□ -0.9
VMP1-204ENST00000587259 PIH1D3Q9NQM4 214 aaKnown RBP9.44□□□□□ -0.9
VMP1-204ENST00000587259 EMILIN3Q9NT22 766 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 TLR7Q9NYK1 1049 aaKnown RBP9.44□□□□□ -0.9
VMP1-204ENST00000587259 FLRT1Q9NZU1 646 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 MORF4L1Q9UBU8 362 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 OGDHLQ9ULD0 1010 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 FLT1P17948 1338 aa9.44□□□□□ -0.9
VMP1-204ENST00000587259 CYP2E1P05181 493 aaPredicted RBP9.43□□□□□ -0.9
VMP1-204ENST00000587259 LDHCP07864 332 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 GSTO1P78417 241 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 MAP3K21Q5TCX8 1036 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 NAA16Q6N069 864 aaPredicted RBP9.43□□□□□ -0.9
VMP1-204ENST00000587259 GPRC5AQ8NFJ5 357 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 KIF1BPQ96EK5 621 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 TMOD4Q9NZQ9 345 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 PI4KBQ9UBF8 816 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 ZBTB21Q9ULJ3 1066 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
VMP1-204ENST00000587259 MYO5AQ9Y4I1 1855 aaKnown RBP9.42□□□□□ -0.9
VMP1-204ENST00000587259 CNMDO75829 334 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 GH2P01242 217 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 ZKSCAN1P17029 563 aaPredicted RBP9.42□□□□□ -0.9
VMP1-204ENST00000587259 BMP8BP34820 402 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 ZAP70P43403 619 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 ERVK-24P63145 666 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 G3BP1Q13283 466 aaKnown RBP eCLIP9.42□□□□□ -0.9
VMP1-204ENST00000587259 PABPC4Q13310 644 aaKnown RBP eCLIP9.42□□□□□ -0.9
VMP1-204ENST00000587259 TTC39AQ5SRH9 613 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 WDR78Q5VTH9 848 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 GPR142Q7Z601 462 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 TDHQ8IZJ6 230 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
VMP1-204ENST00000587259 ANKLE1Q8NAG6 615 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 MIGA1Q8NAN2 632 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 USP6NLQ92738 828 aa9.42□□□□□ -0.9
VMP1-204ENST00000587259 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
VMP1-204ENST00000587259 WDR18Q9BV38 432 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms