RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PTPRAP18433 802 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 MCM5P33992 734 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 NT5C2P49902 561 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-216ENST00000583804 CLEC10AQ8IUN9 316 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-216ENST00000583804 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 TLL2Q9Y6L7 1015 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 ZHX2Q9Y6X8 837 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 TRPM7Q96QT4 1865 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
TOP3A-216ENST00000583804 PRC1O43663 620 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
TOP3A-216ENST00000583804 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 ZNF157P51786 506 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-216ENST00000583804 ICA1Q05084 483 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
TOP3A-216ENST00000583804 ERO1BQ86YB8 467 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-216ENST00000583804 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
TOP3A-216ENST00000583804 ERICH2A1L162 156 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
TOP3A-216ENST00000583804 ANTXR2P58335 489 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 FGD1P98174 961 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
TOP3A-216ENST00000583804 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
TOP3A-216ENST00000583804 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 RGMBQ6NW40 437 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 HSCBQ8IWL3 235 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 OPTNQ96CV9 577 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 TM6SF1Q9BZW5 370 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-216ENST00000583804 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 PDRG1Q9NUG6 133 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 CLIP2Q9UDT6 1046 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
TOP3A-216ENST00000583804 MYH8P13535 1937 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 TTLL1O95922 423 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 PPATQ06203 517 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 SPP2Q13103 211 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 GRM1Q13255 1194 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 CCDC178Q5BJE1 867 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 RUFY3Q7L099 469 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 ACER1Q8TDN7 264 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 FEZ1Q99689 392 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-216ENST00000583804 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 TNKSO95271 1327 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 PLIN4Q96Q06 1357 aa12.86□□□□□ -0.35
TOP3A-216ENST00000583804 TRIM75PA6NK02 468 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 RAD21O60216 631 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 ST18O60284 1047 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 DTNBO60941 627 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 AK2P54819 239 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 HTRA3P83110 453 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
TOP3A-216ENST00000583804 WTAPQ15007 396 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 WNK4Q96J92 1243 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 WDR18Q9BV38 432 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 AFG3L2Q9Y4W6 797 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 A0A1W2PRG0 241 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 USP17L10C9JJH3 530 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 ECE1P42892 770 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 PPIL2Q13356 520 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
TOP3A-216ENST00000583804 DEFB115Q30KQ5 88 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
TOP3A-216ENST00000583804 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 Q6ZUG5 572 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
TOP3A-216ENST00000583804 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-216ENST00000583804 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 TTC14Q96N46 770 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 SH2D4AQ9H788 454 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
TOP3A-216ENST00000583804 DOCK1Q14185 1865 aa12.84□□□□□ -0.35
TOP3A-216ENST00000583804 OTOFQ9HC10 1997 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms