RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 HSD3B7Q9H2F3 369 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 SOS2Q07890 1332 aaPredicted RBP17.35■□□□□ 0.37
USP43-202ENST00000570475 PLCD1P51178 756 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 TMTC2Q8N394 836 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 TFR2Q9UP52 801 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 ERLIN1O75477 346 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 CAVIN4Q5BKX8 364 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 TRIM47Q96LD4 638 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 PSMB7Q99436 277 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 SPATA31A3Q5VYP0 1347 aa17.35■□□□□ 0.37
USP43-202ENST00000570475 STAT6P42226 847 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 EARS2Q5JPH6 523 aaKnown RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 ENOX1Q8TC92 643 aaKnown RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 PDE11AQ9HCR9 933 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 CTAGE15A4D2H0 777 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 NUTM2BA6NNL0 878 aaPredicted RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 NUTM2EB1AL46 878 aaPredicted RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 CTAGE8P0CG41 777 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 H2AFXP16104 143 aaPredicted RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 LIFRP42702 1097 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 LONRF2Q1L5Z9 754 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 LEKR1Q6ZMV7 388 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 CTAGE6Q86UF2 777 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 CTAGE4Q8IX94 777 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 MARCH6O60337 910 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 CSF1RP07333 972 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 CC2D1AQ6P1N0 951 aaPredicted RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 RAD9BQ6WBX8 426 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 C10orf67Q8IYJ2 551 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 GPR161Q8N6U8 529 aaKnown RBP17.34■□□□□ 0.37
USP43-202ENST00000570475 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
USP43-202ENST00000570475 CAPN2P17655 700 aa17.33■□□□□ 0.37
USP43-202ENST00000570475 UBA7P41226 1012 aa17.33■□□□□ 0.37
USP43-202ENST00000570475 PLEKHA4Q9H4M7 779 aa17.33■□□□□ 0.37
USP43-202ENST00000570475 CCDC194A0A1B0GVG4 234 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 ANKRD65E5RJM6 399 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 MRPS25P82663 173 aaKnown RBP17.33■□□□□ 0.36
USP43-202ENST00000570475 CHRNDQ07001 517 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 IQUBQ8NA54 791 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 SRPRBQ9Y5M8 271 aaKnown RBP17.33■□□□□ 0.36
USP43-202ENST00000570475 TUBB4AP04350 444 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 CD44P16070 742 aaKnown RBP17.33■□□□□ 0.36
USP43-202ENST00000570475 CCDC178Q5BJE1 867 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 HEATR3Q7Z4Q2 680 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
USP43-202ENST00000570475 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 JADE2Q9NQC1 790 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 GDAQ9Y2T3 454 aa17.33■□□□□ 0.36
USP43-202ENST00000570475 TRIM21P19474 475 aaKnown RBP17.32■□□□□ 0.36
USP43-202ENST00000570475 NCAPH2Q6IBW4 605 aa17.32■□□□□ 0.36
USP43-202ENST00000570475 NELFBQ8WX92 580 aa17.32■□□□□ 0.36
USP43-202ENST00000570475 MKNK2Q9HBH9 465 aa17.32■□□□□ 0.36
USP43-202ENST00000570475 MACROD2A1Z1Q3 448 aa17.32■□□□□ 0.36
USP43-202ENST00000570475 TAF3Q5VWG9 929 aa17.32■□□□□ 0.36
USP43-202ENST00000570475 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
USP43-202ENST00000570475 TUBGCP6Q96RT7 1819 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
USP43-202ENST00000570475 BRINP3Q76B58 766 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 SGMS1Q86VZ5 419 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 USP5P45974 858 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
USP43-202ENST00000570475 TRIM10Q9UDY6 481 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 A0A087X0B3 334 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 FANCGO15287 622 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 SASH3O75995 380 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 SSBP05455 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
USP43-202ENST00000570475 CUL4BQ13620 913 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
USP43-202ENST00000570475 FAM170AA1A519 330 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 GNAT2P19087 354 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 EVX2Q03828 476 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 MORC3Q14149 939 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 ZNHIT6Q9NWK9 470 aaKnown RBP17.3■□□□□ 0.36
USP43-202ENST00000570475 PP2D1A8MPX8 630 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 EIF3JO75822 258 aaKnown RBP17.3■□□□□ 0.36
USP43-202ENST00000570475 ABL1P00519 1130 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 MTIF2P46199 727 aaKnown RBP17.3■□□□□ 0.36
USP43-202ENST00000570475 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 ANKRD18AQ8IVF6 992 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 ENAHQ8N8S7 591 aaPredicted RBP17.3■□□□□ 0.36
USP43-202ENST00000570475 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 CYP2D6P10635 497 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 SLAIN2Q9P270 581 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 ADGRG1Q9Y653 693 aa17.3■□□□□ 0.36
USP43-202ENST00000570475 OVOS2A0A0G2JMS6 1433 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms