RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 MAP2K1Q02750 393 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-209ENST00000569919 HYAL2Q12891 473 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 DEFB115Q30KQ5 88 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 PEAR1Q5VY43 1037 aaPredicted RBP8.13□□□□□ -1.11
UBFD1-209ENST00000569919 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
UBFD1-209ENST00000569919 NXPE4Q6UWF7 544 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 NCAPG2Q86XI2 1143 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 C2CD5Q86YS7 1000 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 BCO2Q9BYV7 579 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 NARFQ9UHQ1 456 aa8.13□□□□□ -1.11
UBFD1-209ENST00000569919 PASKQ96RG2 1323 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 A0A1W2PP55 124 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 NFKBIEO00221 500 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
UBFD1-209ENST00000569919 DDNO94850 711 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-209ENST00000569919 KIF4AO95239 1232 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 CTSHP09668 335 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 BMP4P12644 408 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 HOXD8P13378 290 aaPredicted RBP8.12□□□□□ -1.11
UBFD1-209ENST00000569919 GRM2Q14416 872 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 NFIXQ14938 502 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 C1orf141Q5JVX7 400 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 SYT9Q86SS6 491 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 LDHDQ86WU2 507 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 NSUN5Q96P11 429 aaKnown RBP8.12□□□□□ -1.11
UBFD1-209ENST00000569919 SUV39H2Q9H5I1 410 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
UBFD1-209ENST00000569919 MYH14Q7Z406 1995 aaKnown RBP8.11□□□□□ -1.11
UBFD1-209ENST00000569919 LTBP3Q9NS15 1303 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 CCDC85CA6NKD9 419 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 MX2P20592 715 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 PDE6BP35913 854 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 NRLP54845 237 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 ZNF468Q5VIY5 522 aaPredicted RBP8.11□□□□□ -1.11
UBFD1-209ENST00000569919 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
UBFD1-209ENST00000569919 TRPM4Q8TD43 1214 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.112e-8■■□□□ 13
UBFD1-209ENST00000569919 CRELD1Q96HD1 420 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 SRCIN1Q9C0H9 1055 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 EHD4Q9H223 541 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
UBFD1-209ENST00000569919 COL5A3P25940 1745 aaPredicted RBP8.1□□□□□ -1.11
UBFD1-209ENST00000569919 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 HSPA8P11142 646 aaKnown RBP8.1□□□□□ -1.11
UBFD1-209ENST00000569919 ACPPP15309 386 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
UBFD1-209ENST00000569919 EIF4A2Q14240 407 aaKnown RBP8.1□□□□□ -1.11
UBFD1-209ENST00000569919 GAS6Q14393 721 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 GPR161Q8N6U8 529 aaKnown RBP8.1□□□□□ -1.11
UBFD1-209ENST00000569919 CEP120Q8N960 986 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 BRIP1Q9BX63 1249 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 FAM8A1Q9UBU6 413 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 PCNTO95613 3336 aa8.1□□□□□ -1.11
UBFD1-209ENST00000569919 WDR33Q9C0J8 1336 aaKnown RBP8.09□□□□□ -1.11
UBFD1-209ENST00000569919 RASSF10A6NK89 507 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 J3QW42 95 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 SIN3BO75182 1162 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 USP17L7P0C7H9 530 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 CYP19A1P11511 503 aaPredicted RBP8.09□□□□□ -1.11
UBFD1-209ENST00000569919 GPLD1P80108 840 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 TBC1D8BQ0IIM8 1120 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 SOGA3Q5TF21 947 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 HFE2Q6ZVN8 426 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
UBFD1-209ENST00000569919 DNAJC10Q8IXB1 793 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 NPAS3Q8IXF0 933 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 SPACA7Q96KW9 195 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 OSMRQ99650 979 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 ZKSCAN3Q9BRR0 538 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 UBE2OQ9C0C9 1292 aaKnown RBP8.09□□□□□ -1.11
UBFD1-209ENST00000569919 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 TAF1DQ9H5J8 278 aaPredicted RBP8.09□□□□□ -1.11
UBFD1-209ENST00000569919 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
UBFD1-209ENST00000569919 PPP4R2Q9NY27 417 aa8.09□□□□□ -1.11
UBFD1-209ENST00000569919 SOS1Q07889 1333 aaPredicted RBP8.08□□□□□ -1.12
UBFD1-209ENST00000569919 H3BM21 787 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 TRPA1O75762 1119 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
UBFD1-209ENST00000569919 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 DZANK1Q9NVP4 752 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 HACL1Q9UJ83 578 aa8.08□□□□□ -1.12
UBFD1-209ENST00000569919 A0A087WZG4 1122 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 ECE1P42892 770 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 FANCCQ00597 558 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 PCSK7Q16549 785 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 MEI1Q5TIA1 1274 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 CNTROBQ8N137 903 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 TCF12Q99081 682 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 LIN7BQ9HAP6 207 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
UBFD1-209ENST00000569919 METTL5Q9NRN9 209 aaKnown RBP8.07□□□□□ -1.12
UBFD1-209ENST00000569919 KLF15Q9UIH9 416 aa8.07□□□□□ -1.12
UBFD1-209ENST00000569919 DICER1Q9UPY3 1922 aaKnown RBP8.07□□□□□ -1.12
UBFD1-209ENST00000569919 ARAFP10398 606 aa8.06□□□□□ -1.12
UBFD1-209ENST00000569919 ZNF76P36508 570 aa8.06□□□□□ -1.12
UBFD1-209ENST00000569919 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms