RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 VTI1BQ9UEU0 232 aa8.69□□□□□ -1.02
HMBOX1-216ENST00000561377 PF4P02776 101 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 GLI1P08151 1106 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 YARSP54577 528 aaKnown RBP8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 FYB2Q5VWT5 728 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 CYB5D2Q8WUJ1 264 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 FAM84AQ96KN4 292 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 RSRP1Q9BUV0 290 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 CORINQ9Y5Q5 1042 aa8.68□□□□□ -1.02
HMBOX1-216ENST00000561377 FAM221AA4D161 298 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 ZNF503-AS2A6NEH8 195 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 MLANAQ16655 118 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 TMEM201Q5SNT2 666 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 TMEM74Q96NL1 305 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 TRIT1Q9H3H1 467 aaKnown RBP8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 C19orf73Q9NVV2 129 aa8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.67□□□□□ -1.02
HMBOX1-216ENST00000561377 F6X3S4 739 aa8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 GBP2P32456 591 aaPredicted RBP8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 ZNF124Q15973 351 aa8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 TMEM67Q5HYA8 995 aa8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 RHOVQ96L33 236 aa8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 Q96M66 194 aa8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 KCNH3Q9ULD8 1083 aa8.66□□□□□ -1.02
HMBOX1-216ENST00000561377 DBX1A6NMT0 343 aa8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 F13A1P00488 732 aa8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 MESP2Q0VG99 397 aa8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 MPZL3Q6UWV2 235 aa8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 BHLHE22Q8NFJ8 381 aaPredicted RBP8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 PPP1R13LQ8WUF5 828 aa8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 LIN37Q96GY3 246 aaPredicted RBP8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 SLAMF8Q9P0V8 285 aa8.65□□□□□ -1.02
HMBOX1-216ENST00000561377 UPK3BL1B0FP48 263 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 UPK3BL2E5RIL1 263 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 ESR1P03372 595 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 RAC2P15153 192 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 SNAP47Q5SQN1 464 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 CREG2Q8IUH2 290 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 SLFN12Q8IYM2 578 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 GPATCH2Q9NW75 528 aa8.64□□□□□ -1.03
HMBOX1-216ENST00000561377 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 TPP2P29144 1249 aaPredicted RBP8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 TAGLNQ01995 201 aaKnown RBP8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 MPP2Q14168 576 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 RNF141Q8WVD5 230 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 GPR62Q9BZJ7 368 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 DUSP15Q9H1R2 295 aaPredicted RBP8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 REV1Q9UBZ9 1251 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
HMBOX1-216ENST00000561377 TNNI2P48788 182 aa8.62□□□□□ -1.03
HMBOX1-216ENST00000561377 DTWD2Q8NBA8 298 aa8.62□□□□□ -1.03
HMBOX1-216ENST00000561377 GZF1Q9H116 711 aaPredicted RBP8.62□□□□□ -1.03
HMBOX1-216ENST00000561377 KRTAP4-8A0A0G2JLE6 195 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 MINDY4BA8MYZ0 360 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 SRFP11831 508 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 RALGPS1Q5JS13 557 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 PPP1R16BQ96T49 567 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 KLHL3Q9UH77 587 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 DUSP13Q9UII6 198 aa8.61□□□□□ -1.03
HMBOX1-216ENST00000561377 DNAJC25-GNG10A0A024R161 153 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 HTR3BO95264 441 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 GAB4Q2WGN9 574 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 PRR23BQ6ZRT6 265 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 REC114Q7Z4M0 266 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 ABHD4Q8TB40 342 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 POLR3KQ9Y2Y1 108 aaPredicted RBP8.6□□□□□ -1.03
HMBOX1-216ENST00000561377 WASH4PA8MWX3 477 aa8.59□□□□□ -1.03
HMBOX1-216ENST00000561377 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
HMBOX1-216ENST00000561377 HK2P52789 917 aa8.59□□□□□ -1.03
HMBOX1-216ENST00000561377 MLECQ14165 292 aa8.59□□□□□ -1.03
HMBOX1-216ENST00000561377 ASPNQ9BXN1 380 aa8.59□□□□□ -1.03
HMBOX1-216ENST00000561377 CHURC1-FNTBB4DL54 471 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 EGR3Q06889 387 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 FAM196AQ6ZSG2 479 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 PHACTR4Q8IZ21 702 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 BAHD1Q8TBE0 780 aaPredicted RBP8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 MYLIPQ8WY64 445 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 KREMEN1Q96MU8 473 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 BCL11AQ9H165 835 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 KBTBD4Q9NVX7 518 aa8.58□□□□□ -1.04
HMBOX1-216ENST00000561377 HPXP02790 462 aa8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 GARTP22102 1010 aa8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 LTKP29376 864 aa8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 CWF19L2Q2TBE0 894 aaKnown RBP8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 ERMP1Q7Z2K6 904 aa8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 FBXO15Q8NCQ5 510 aaPredicted RBP8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 ADAMTS10Q9H324 1103 aa8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 ROBO2Q9HCK4 1378 aa8.57□□□□□ -1.04
HMBOX1-216ENST00000561377 LRRN2O75325 713 aa8.56□□□□□ -1.04
HMBOX1-216ENST00000561377 TSPAN15O95858 294 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms