RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
CASC4-211ENST00000561305 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.72□□□□□ -1.33
CASC4-211ENST00000561305 ZSWIM5Q9P217 1185 aa6.72□□□□□ -1.33
CASC4-211ENST00000561305 UPK3BL1B0FP48 263 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.71□□□□□ -1.34
CASC4-211ENST00000561305 UPK3BL2E5RIL1 263 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 BPNT1O95861 308 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 F13A1P00488 732 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 ESR1P03372 595 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 GDNFP39905 211 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 MESP2Q0VG99 397 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 PWP1Q13610 501 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 KCNMB1Q16558 191 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 TMPRSS7Q7RTY8 843 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 CCDC120Q96HB5 630 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 MRS2Q9HD23 443 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 VTI1BQ9UEU0 232 aa6.71□□□□□ -1.34
CASC4-211ENST00000561305 F6X3S4 739 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 SRFP11831 508 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 GARTP22102 1010 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
CASC4-211ENST00000561305 ITGAEP38570 1179 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 YARSP54577 528 aaKnown RBP6.7□□□□□ -1.34
CASC4-211ENST00000561305 SLFN12Q8IYM2 578 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 FAM13CQ8NE31 585 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 ALPK1Q96QP1 1244 aa6.7□□□□□ -1.34
CASC4-211ENST00000561305 GZF1Q9H116 711 aaPredicted RBP6.7□□□□□ -1.34
CASC4-211ENST00000561305 DUSP15Q9H1R2 295 aaPredicted RBP6.7□□□□□ -1.34
CASC4-211ENST00000561305 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
CASC4-211ENST00000561305 GLI1P08151 1106 aa6.69□□□□□ -1.34
CASC4-211ENST00000561305 KIRREL1Q96J84 757 aa6.69□□□□□ -1.34
CASC4-211ENST00000561305 FAM84AQ96KN4 292 aa6.69□□□□□ -1.34
CASC4-211ENST00000561305 GPR62Q9BZJ7 368 aa6.69□□□□□ -1.34
CASC4-211ENST00000561305 REV1Q9UBZ9 1251 aa6.69□□□□□ -1.34
CASC4-211ENST00000561305 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
CASC4-211ENST00000561305 LRRC10BA6NIK2 292 aa6.68□□□□□ -1.34
CASC4-211ENST00000561305 MPP2Q14168 576 aa6.68□□□□□ -1.34
CASC4-211ENST00000561305 GAB4Q2WGN9 574 aa6.68□□□□□ -1.34
CASC4-211ENST00000561305 KCNQ5Q9NR82 932 aa6.68□□□□□ -1.34
CASC4-211ENST00000561305 WASH4PA8MWX3 477 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 FAM160A1Q05DH4 1040 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 TMEM67Q5HYA8 995 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 ERMP1Q7Z2K6 904 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 DTWD2Q8NBA8 298 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 GOLM1Q8NBJ4 401 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 RNF141Q8WVD5 230 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 LIN37Q96GY3 246 aaPredicted RBP6.67□□□□□ -1.34
CASC4-211ENST00000561305 TRIT1Q9H3H1 467 aaKnown RBP6.67□□□□□ -1.34
CASC4-211ENST00000561305 SLAMF8Q9P0V8 285 aa6.67□□□□□ -1.34
CASC4-211ENST00000561305 DNAJC25-GNG10A0A024R161 153 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 MINDY4BA8MYZ0 360 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 CHURC1-FNTBB4DL54 471 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 HTR3BO95264 441 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 TPP2P29144 1249 aaPredicted RBP6.66□□□□□ -1.34
CASC4-211ENST00000561305 ZNF124Q15973 351 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 MLANAQ16655 118 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 SNAP47Q5SQN1 464 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 FAM196AQ6ZSG2 479 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 TTC6Q86TZ1 520 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 CREG2Q8IUH2 290 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 KSR1Q8IVT5 923 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 BHLHE22Q8NFJ8 381 aaPredicted RBP6.66□□□□□ -1.34
CASC4-211ENST00000561305 CCDC74BQ96LY2 380 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 KCNH3Q9ULD8 1083 aa6.66□□□□□ -1.34
CASC4-211ENST00000561305 DBX1A6NMT0 343 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 GRIN3BO60391 1043 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 RALGPS1Q5JS13 557 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
CASC4-211ENST00000561305 FBXO27Q8NI29 283 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 SLC38A3Q99624 504 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 LRRC3Q9BY71 257 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 COPRSQ9NQ92 184 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 GPATCH2Q9NW75 528 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 TMEM59LQ9UK28 342 aa6.65□□□□□ -1.34
CASC4-211ENST00000561305 ROBO2Q9HCK4 1378 aa6.65□□□□□ -1.35
CASC4-211ENST00000561305 GREM1O60565 184 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 DNAJA2O60884 412 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 LRRN2O75325 713 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 HPXP02790 462 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 MRPL58Q14197 206 aaKnown RBP6.64□□□□□ -1.35
CASC4-211ENST00000561305 FBXL19Q6PCT2 694 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 PRR23BQ6ZRT6 265 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 BAHD1Q8TBE0 780 aaPredicted RBP6.64□□□□□ -1.35
CASC4-211ENST00000561305 VWCEQ96DN2 955 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 KREMEN1Q96MU8 473 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 ADAMTS10Q9H324 1103 aa6.64□□□□□ -1.35
CASC4-211ENST00000561305 PKN1Q16512 942 aa6.63□□□□□ -1.35
CASC4-211ENST00000561305 ASPNQ9BXN1 380 aa6.63□□□□□ -1.35
CASC4-211ENST00000561305 SP110Q9HB58 689 aa6.63□□□□□ -1.35
CASC4-211ENST00000561305 KLHL3Q9UH77 587 aa6.63□□□□□ -1.35
CASC4-211ENST00000561305 DUSP13Q9UII6 198 aa6.63□□□□□ -1.35
CASC4-211ENST00000561305 RBM47A0AV96 593 aaKnown RBP6.62□□□□□ -1.35
CASC4-211ENST00000561305 TLR3O15455 904 aaKnown RBP6.62□□□□□ -1.35
CASC4-211ENST00000561305 ATE1O95260 518 aa6.62□□□□□ -1.35
CASC4-211ENST00000561305 RAC2P15153 192 aa6.62□□□□□ -1.35
CASC4-211ENST00000561305 TNNI2P48788 182 aa6.62□□□□□ -1.35
CASC4-211ENST00000561305 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
CASC4-211ENST00000561305 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms