RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ASCC2Q9H1I8 757 aaPredicted RBP15.51■□□□□ 0.07
CTDSPL2-209ENST00000560620 MKNK2Q9HBH9 465 aa15.51■□□□□ 0.07
CTDSPL2-209ENST00000560620 LOC285556D6RIA3 1793 aa15.51■□□□□ 0.07
CTDSPL2-209ENST00000560620 ADGRA2Q96PE1 1338 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 FCGRTP55899 365 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 CAP1Q01518 475 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 ATP2B2Q01814 1243 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 CCDC129Q6ZRS4 1044 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 IFNL3Q8IZI9 196 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 ACER1Q8TDN7 264 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 CCDC17Q96LX7 622 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 TAOK2Q9UL54 1235 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 ZSWIM8A7E2V4 1837 aa15.5■□□□□ 0.07
CTDSPL2-209ENST00000560620 GNRH1P01148 92 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 BCRP11274 1271 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 AKR1B1P15121 316 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 HOXD10P28358 340 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 GCLCP48506 637 aaPredicted RBP15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 SOX10P56693 466 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 SBK1Q52WX2 424 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 ZNF287Q9HBT7 754 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 ARHGEF10LQ9HCE6 1279 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 EPB41L4AQ9HCS5 686 aaPredicted RBP15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 EMILIN3Q9NT22 766 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 PTCH2Q9Y6C5 1203 aa15.49■□□□□ 0.07
CTDSPL2-209ENST00000560620 RAD21O60216 631 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 GUCY1A2P33402 732 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 ICA1Q05084 483 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 SLC9C1Q4G0N8 1177 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 RAET1EQ8TD07 263 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 TRIM47Q96LD4 638 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 FAM227BQ96M60 508 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 KIAA1683Q9H0B3 1180 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 HELLSQ9NRZ9 838 aa15.48■□□□□ 0.07
CTDSPL2-209ENST00000560620 TNPO2O14787 897 aaKnown RBP15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 SLC3A2P08195 630 aaKnown RBP15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 HOXA7P31268 230 aaPredicted RBP15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 HERVK_113P62684 666 aa15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 FAM110CQ1W6H9 321 aa15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 NBPF11Q86T75 865 aa15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 CLEC10AQ8IUN9 316 aa15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 CCAR1Q8IX12 1150 aaKnown RBP15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 ZNF444Q8N0Y2 327 aaPredicted RBP15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 P2RX7Q99572 595 aaKnown RBP15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 OSBPL3Q9H4L5 887 aa15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 SH2D4AQ9H788 454 aa15.47■□□□□ 0.07
CTDSPL2-209ENST00000560620 MYPNQ86TC9 1320 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L15C9J2P7 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L13C9JLJ4 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L11C9JVI0 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L18D6R9N7 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L22D6RA61 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L17D6RBQ6 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L19D6RCP7 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L20D6RJB6 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 PRDM1O75626 825 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 MYCP01106 439 aaPredicted RBP15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 VCAM1P19320 739 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 CTGFP29279 349 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 PRMT2P55345 433 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 USP17L24Q0WX57 530 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 NMIQ13287 307 aaPredicted RBP15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 MCMDC2Q4G0Z9 681 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 C12orf42Q96LP6 360 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 PAGR1Q9BTK6 254 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 TANGO6Q9C0B7 1094 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 RPAP3Q9H6T3 665 aaPredicted RBP15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 SRRDQ9UH36 339 aa15.46■□□□□ 0.07
CTDSPL2-209ENST00000560620 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 A0A1W2PRG0 241 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 SDSP20132 328 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 PDE4BQ07343 736 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 SPICE1Q8N0Z3 855 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 COA7Q96BR5 231 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 KANSL2Q9H9L4 492 aa15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 CWC22Q9HCG8 908 aaKnown RBP15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 BIN2Q9UBW5 565 aaPredicted RBP15.45■□□□□ 0.06
CTDSPL2-209ENST00000560620 MGAMO43451 1857 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 EEF2P13639 858 aaKnown RBP15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 RASA1P20936 1047 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 MFAP1P55081 439 aaKnown RBP15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 PRKCZQ05513 592 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 PPARAQ07869 468 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 VPS53Q5VIR6 699 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 CWC27Q6UX04 472 aaKnown RBP15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 TICAM2Q86XR7 235 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 GPRC5AQ8NFJ5 357 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 SH3TC2Q8TF17 1288 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 GTF3C2Q8WUA4 911 aaPredicted RBP15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 ROBO3Q96MS0 1386 aa15.44■□□□□ 0.06
CTDSPL2-209ENST00000560620 HIP1O00291 1037 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 PEX10O60683 326 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 TSPY3P0CV98 308 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 TSPY8P0CW00 308 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 PDE4AP27815 886 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 CTDSPL2Q05D32 466 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 CATSPERGQ6ZRH7 1159 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 GOPCQ9HD26 462 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms