RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	SEMA7A	O75326	666 aa		7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	CST3	P01034	146 aa	Predicted RBP	7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	TPP2	P29144	1249 aa	Predicted RBP	7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	CDK8	P49336	464 aa		7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	PDZD8	Q8NEN9	1154 aa		7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	COX4I2	Q96KJ9	171 aa		7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	DPH2	Q9BQC3	489 aa	Predicted RBP	7.31	□□□□□ -1.24
SLTM-223	ENST00000560532	GRK4	P32298	578 aa		7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	KRTAP10-2	P60368	255 aa		7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	ZNF385B	Q569K4	471 aa		7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	SCARA3	Q6AZY7	606 aa		7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	INTS4	Q96HW7	963 aa	Known RBP	7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	RTEL1	Q9NZ71	1219 aa		7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	PPM1H	Q9ULR3	514 aa		7.3	□□□□□ -1.24
SLTM-223	ENST00000560532	ZGLP1	P0C6A0	271 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	PDE6B	P35913	854 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	EGR3	Q06889	387 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	SSPN	Q14714	243 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	LILRA2	Q8N149	483 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	PIWIL2	Q8TC59	973 aa	Known RBP	7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	GAL3ST3	Q96A11	431 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532		Q96M66	194 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	GCM1	Q9NP62	436 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	DUSP13	Q9UII6	198 aa		7.29	□□□□□ -1.24
SLTM-223	ENST00000560532	TEX51	A0A1B0GUA7	166 aa		7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	RFXAP	O00287	272 aa		7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	PEX10	O60683	326 aa		7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	OXR1	Q8N573	874 aa		7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	UST	Q9Y2C2	406 aa		7.28	□□□□□ -1.24
SLTM-223	ENST00000560532	ENOX2	Q16206	610 aa	Known RBP	7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	GAB4	Q2WGN9	574 aa		7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	GGN	Q86UU5	652 aa		7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	TRIT1	Q9H3H1	467 aa	Known RBP	7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	CWC22	Q9HCG8	908 aa	Known RBP	7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	GPR160	Q9UJ42	338 aa		7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	YBX2	Q9Y2T7	364 aa	Known RBP	7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	SNCAIP	Q9Y6H5	919 aa		7.27	□□□□□ -1.25
SLTM-223	ENST00000560532	FITM1	A5D6W6	292 aa		7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	LTK	P29376	864 aa		7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	GALK1	P51570	392 aa		7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	TXNDC2	Q86VQ3	553 aa		7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	CXorf38	Q8TB03	319 aa		7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	OSBPL7	Q9BZF2	842 aa		7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	ZNF552	Q9H707	407 aa	Predicted RBP	7.26	□□□□□ -1.25
SLTM-223	ENST00000560532	PI3	P19957	117 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	ETV3	P41162	512 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	TMEM151B	Q8IW70	566 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	PANK1	Q8TE04	598 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	SRCIN1	Q9C0H9	1055 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	XYLT2	Q9H1B5	865 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	C1orf115	Q9H7X2	142 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	GPATCH2	Q9NW75	528 aa		7.25	□□□□□ -1.25
SLTM-223	ENST00000560532	OTOL1	A6NHN0	477 aa	Predicted RBP	7.24	□□□□□ -1.25
SLTM-223	ENST00000560532	SASH1	O94885	1247 aa		7.24	□□□□□ -1.25
SLTM-223	ENST00000560532	PLCB3	Q01970	1234 aa		7.24	□□□□□ -1.25
SLTM-223	ENST00000560532	TJP2	Q9UDY2	1190 aa		7.24	□□□□□ -1.25
SLTM-223	ENST00000560532	PCDHA11	Q9Y5I1	949 aa		7.24	□□□□□ -1.25
SLTM-223	ENST00000560532	CELA3B	P08861	270 aa		7.23	□□□□□ -1.25
SLTM-223	ENST00000560532	NFKB2	Q00653	900 aa		7.23	□□□□□ -1.25
SLTM-223	ENST00000560532	DSC3	Q14574	896 aa		7.23	□□□□□ -1.25
SLTM-223	ENST00000560532	FEZF2	Q8TBJ5	459 aa		7.23	□□□□□ -1.25
SLTM-223	ENST00000560532	DHX38	Q92620	1227 aa	Known RBP	7.23	□□□□□ -1.25
SLTM-223	ENST00000560532	SETDB2	Q96T68	719 aa		7.23	□□□□□ -1.25
SLTM-223	ENST00000560532	PGR	P06401	933 aa		7.22	□□□□□ -1.25
SLTM-223	ENST00000560532	NR0B2	Q15466	257 aa		7.22	□□□□□ -1.25
SLTM-223	ENST00000560532	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.22	□□□□□ -1.25
SLTM-223	ENST00000560532	DNAJB8	Q8NHS0	232 aa		7.22	□□□□□ -1.25
SLTM-223	ENST00000560532	SYTL4	Q96C24	671 aa	Predicted RBP	7.22	□□□□□ -1.25
SLTM-223	ENST00000560532	GTF3C3	Q9Y5Q9	886 aa		7.22	□□□□□ -1.25
SLTM-223	ENST00000560532	ADAMTS20	P59510	1910 aa		7.21	□□□□□ -1.25
SLTM-223	ENST00000560532	PSPN	O60542	156 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	MAPK8	P45983	427 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	SEPT6	Q14141	434 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	TTBK2	Q6IQ55	1244 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	SIRT2	Q8IXJ6	389 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	MRPL41	Q8IXM3	137 aa	Known RBP	7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	ZDHHC14	Q8IZN3	488 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	ANKRD24	Q8TF21	1146 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	TMEM87B	Q96K49	555 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	GPR62	Q9BZJ7	368 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	BIN2	Q9UBW5	565 aa	Predicted RBP	7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	DCTN4	Q9UJW0	460 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	IRAK3	Q9Y616	596 aa		7.21	□□□□□ -1.26
SLTM-223	ENST00000560532	TREH	O43280	583 aa		7.2	□□□□□ -1.26
SLTM-223	ENST00000560532	AFF3	P51826	1226 aa	Known RBP	7.2	□□□□□ -1.26
SLTM-223	ENST00000560532	VMAC	Q2NL98	169 aa		7.2	□□□□□ -1.26
SLTM-223	ENST00000560532	DTWD2	Q8NBA8	298 aa		7.2	□□□□□ -1.26
SLTM-223	ENST00000560532	EBF1	Q9UH73	591 aa		7.2	□□□□□ -1.26
SLTM-223	ENST00000560532	OR14I1	A6ND48	311 aa		7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	USP17L7	P0C7H9	530 aa		7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	ADGRF1	Q5T601	910 aa		7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	SLC6A19	Q695T7	634 aa		7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	SPPL2C	Q8IUH8	684 aa		7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	SIGLEC10	Q96LC7	697 aa		7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	MBD1	Q9UIS9	605 aa	Predicted RBP	7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	TTF2	Q9UNY4	1162 aa	Known RBP	7.19	□□□□□ -1.26
SLTM-223	ENST00000560532	GFRA2	O00451	464 aa		7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms