RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CLTBP09497 229 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 HOXC6P09630 235 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 PTPREP23469 700 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 GRB14Q14449 540 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 LRRC41Q15345 812 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.83□□□□□ -0.048e-9■■□□□ 12.2
SMAD3-206ENST00000558739 TBC1D2Q9BYX2 928 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 AS3MTQ9HBK9 375 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 SLC15A5A6NIM6 579 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 RAG1P15918 1043 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 MECOMQ03112 1051 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 MICALL1Q8N3F8 863 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 ARRDC4Q8NCT1 418 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 SIL1Q9H173 461 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 BTBD7Q9P203 1132 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 DENND2AQ9ULE3 1009 aa14.82□□□□□ -0.04
SMAD3-206ENST00000558739 ARIH1Q9Y4X5 557 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-206ENST00000558739 LRRC37A2A6NM11 1700 aa14.81□□□□□ -0.04
SMAD3-206ENST00000558739 GPR75-ASB3A0A0A6YYF3 556 aa14.81□□□□□ -0.04
SMAD3-206ENST00000558739 ZYXQ15942 572 aaKnown RBP14.81□□□□□ -0.04
SMAD3-206ENST00000558739 C1orf53Q5VUE5 145 aa14.81□□□□□ -0.04
SMAD3-206ENST00000558739 C16orf59Q7L2K0 433 aa14.81□□□□□ -0.04
SMAD3-206ENST00000558739 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-206ENST00000558739 CXXC1Q9P0U4 656 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-206ENST00000558739 TACC3Q9Y6A5 838 aa14.81□□□□□ -0.04
SMAD3-206ENST00000558739 TMEM31Q5JXX7 168 aa14.8□□□□□ -0.04
SMAD3-206ENST00000558739 CCDC102BQ68D86 513 aa14.8□□□□□ -0.04
SMAD3-206ENST00000558739 CCDC129Q6ZRS4 1044 aa14.8□□□□□ -0.04
SMAD3-206ENST00000558739 LENG1Q96BZ8 264 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-206ENST00000558739 GNL3LQ9NVN8 582 aaKnown RBP14.8□□□□□ -0.04
SMAD3-206ENST00000558739 USP17L10C9JJH3 530 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 SEPT4O43236 478 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 ASNSP08243 561 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
SMAD3-206ENST00000558739 IL16Q14005 1332 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 CCDC27Q2M243 656 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 TMEM39AQ9NV64 488 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 ZBTB21Q9ULJ3 1066 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 PHF24Q9UPV7 400 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
SMAD3-206ENST00000558739 C5orf42Q9H799 3197 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 WDR87Q6ZQQ6 2873 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 C19orf81C9J6K1 198 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 SEMA3EO15041 775 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
SMAD3-206ENST00000558739 ADORA2AP29274 412 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 FAAP100Q0VG06 881 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 HERC5Q9UII4 1024 aaKnown RBP14.78□□□□□ -0.04
SMAD3-206ENST00000558739 YBX2Q9Y2T7 364 aaKnown RBP14.78□□□□□ -0.04
SMAD3-206ENST00000558739 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
SMAD3-206ENST00000558739 COBLO75128 1261 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 GLRX3O76003 335 aaKnown RBP14.77□□□□□ -0.05
SMAD3-206ENST00000558739 PGK1P00558 417 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 CCNA1P78396 465 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 TMEM240Q5SV17 173 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 ZGPATQ8N5A5 531 aaKnown RBP14.77□□□□□ -0.05
SMAD3-206ENST00000558739 SH3RF3Q8TEJ3 882 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-206ENST00000558739 GTF3C2Q8WUA4 911 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-206ENST00000558739 NKX2-4Q9H2Z4 354 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 IVNS1ABPQ9Y6Y0 642 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.05
SMAD3-206ENST00000558739 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-206ENST00000558739 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
SMAD3-206ENST00000558739 ACRP10323 421 aa14.76□□□□□ -0.05
SMAD3-206ENST00000558739 OLFML2BQ68BL8 750 aa14.76□□□□□ -0.05
SMAD3-206ENST00000558739 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
SMAD3-206ENST00000558739 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
SMAD3-206ENST00000558739 MYO15AQ9UKN7 3530 aa14.76□□□□□ -0.05
SMAD3-206ENST00000558739 ZNF318Q5VUA4 2279 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 SPDYE16A6NNV3 312 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-206ENST00000558739 VCAM1P19320 739 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 MRE11P49959 708 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 DPP9Q86TI2 863 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 SLF2Q8IX21 1173 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 SLC44A5Q8NCS7 719 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 NSUN4Q96CB9 384 aaKnown RBP14.75□□□□□ -0.05
SMAD3-206ENST00000558739 USP44Q9H0E7 712 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 TBX21Q9UL17 535 aa14.75□□□□□ -0.05
SMAD3-206ENST00000558739 PA2G4Q9UQ80 394 aaKnown RBP14.75□□□□□ -0.05
SMAD3-206ENST00000558739 ZFHX2Q9C0A1 2572 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-206ENST00000558739 CSF2RAP15509 400 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L2Q6R6M4 530 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 CATSPERGQ6ZRH7 1159 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 ERICH6Q7L0X2 663 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 MAPKAPK5Q8IW41 473 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 PRKRIP1Q9H875 184 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-206ENST00000558739 XPNPEP3Q9NQH7 507 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 PI4KBQ9UBF8 816 aa14.74□□□□□ -0.05
SMAD3-206ENST00000558739 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-206ENST00000558739 PDS5AQ29RF7 1337 aaKnown RBP14.73□□□□□ -0.05
SMAD3-206ENST00000558739 ZNFX1Q9P2E3 1918 aaKnown RBP14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L15C9J2P7 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L13C9JLJ4 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L11C9JVI0 530 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms