RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 CDK8P49336 464 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 KCNA1Q09470 495 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 KCNA10Q16322 511 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 SLC6A19Q695T7 634 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 ATG14Q6ZNE5 492 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 KCNH3Q9ULD8 1083 aa5.21□□□□□ -1.58
VPS13C-205ENST00000558088 PRPF40AO75400 957 aaKnown RBP5.2□□□□□ -1.58
VPS13C-205ENST00000558088 LIG3P49916 1009 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 MAP3K11Q16584 847 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 TSNAXIP1Q2TAA8 658 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 RALGPS1Q5JS13 557 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 LILRA6Q6PI73 481 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 AGMOQ6ZNB7 445 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 C1QL4Q86Z23 238 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 OXR1Q8N573 874 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 DHX38Q92620 1227 aaKnown RBP5.2□□□□□ -1.58
VPS13C-205ENST00000558088 TJP2Q9UDY2 1190 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 DUSP13Q9UII6 198 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 ADAM30Q9UKF2 790 aa5.2□□□□□ -1.58
VPS13C-205ENST00000558088 GFRA2O00451 464 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 HPXP02790 462 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 ESR1P03372 595 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 GLDCP23378 1020 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 TPP2P29144 1249 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-205ENST00000558088 LTKP29376 864 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 YARSP54577 528 aaKnown RBP5.19□□□□□ -1.58
VPS13C-205ENST00000558088 KCNN1Q92952 543 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 ADAMTS10Q9H324 1103 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 PCDHB5Q9Y5E4 795 aa5.19□□□□□ -1.58
VPS13C-205ENST00000558088 PATL2C9JE40 543 aaKnown RBP5.18□□□□□ -1.58
VPS13C-205ENST00000558088 NUAK1O60285 661 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 BPNT1O95861 308 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 MED14OSP0DP75 135 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 CHMP4BP1P59074 171 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 RPL6Q02878 288 aaKnown RBP5.18□□□□□ -1.58
VPS13C-205ENST00000558088 EGR3Q06889 387 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 MCATQ8IVS2 390 aaKnown RBP5.18□□□□□ -1.58
VPS13C-205ENST00000558088 LILRA2Q8N149 483 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 PDZD8Q8NEN9 1154 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 CYB5D2Q8WUJ1 264 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 SLC6A17Q9H1V8 727 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 CD320Q9NPF0 282 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 RAPGEFL1Q9UHV5 662 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 CEP131Q9UPN4 1083 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 AK5Q9Y6K8 562 aa5.18□□□□□ -1.58
VPS13C-205ENST00000558088 FITM1A5D6W6 292 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 ETV2O00321 342 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-205ENST00000558088 KRT1P04264 644 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 TNNI2P48788 182 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 ERVFC1P60507 584 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 AMIGO3Q86WK7 504 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 FAM13CQ8NE31 585 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 DNAJB8Q8NHS0 232 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 JARID2Q92833 1246 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-205ENST00000558088 RNF32Q9H0A6 362 aa5.17□□□□□ -1.58
VPS13C-205ENST00000558088 DUSP15Q9H1R2 295 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-205ENST00000558088 SMG5Q9UPR3 1016 aaKnown RBP5.17□□□□□ -1.58
VPS13C-205ENST00000558088 SRFP11831 508 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 PLCG1P19174 1290 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 LINC00310P59036 64 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 CHRNEQ04844 493 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 GAB4Q2WGN9 574 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 TTLL10Q6ZVT0 673 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 TSPYL5Q86VY4 417 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-205ENST00000558088 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 SPPL2CQ8IUH8 684 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 GPR62Q9BZJ7 368 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 KCNK12Q9HB15 430 aa5.16□□□□□ -1.58
VPS13C-205ENST00000558088 CWC22Q9HCG8 908 aaKnown RBP5.16□□□□□ -1.58
VPS13C-205ENST00000558088 TFE3P19532 575 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-205ENST00000558088 TRHRP34981 398 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-205ENST00000558088 DUSP4Q13115 394 aa5.15□□□□□ -1.59
VPS13C-205ENST00000558088 EAPPQ56P03 285 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-205ENST00000558088 TMEM132EQ6IEE7 984 aa5.15□□□□□ -1.59
VPS13C-205ENST00000558088 DTWD2Q8NBA8 298 aa5.15□□□□□ -1.59
VPS13C-205ENST00000558088 RNF141Q8WVD5 230 aa5.15□□□□□ -1.59
VPS13C-205ENST00000558088 ACSF2Q96CM8 615 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-205ENST00000558088 Q96M66 194 aa5.15□□□□□ -1.59
VPS13C-205ENST00000558088 DUSP9Q99956 384 aaKnown RBP5.15□□□□□ -1.59
VPS13C-205ENST00000558088 WASH4PA8MWX3 477 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 B8ZZF3 427 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 PRRG2O14669 202 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 SEMA7AO75326 666 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 INHBBP09529 407 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 ZGLP1P0C6A0 271 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 PDE6BP35913 854 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 CLEC16AQ2KHT3 1053 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 ZNF605Q86T29 641 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 CCDC84Q86UT8 332 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-205ENST00000558088 NOC4LQ9BVI4 516 aaKnown RBP5.14□□□□□ -1.59
VPS13C-205ENST00000558088 ASCC2Q9H1I8 757 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-205ENST00000558088 C19orf44Q9H6X5 657 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 PCDHA11Q9Y5I1 949 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 NCANO14594 1321 aa5.14□□□□□ -1.59
VPS13C-205ENST00000558088 ST13P50502 369 aaKnown RBP5.13□□□□□ -1.59
VPS13C-205ENST00000558088 CTSWP56202 376 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 PSMD2Q13200 908 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 SNX17Q15036 470 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 NR0B2Q15466 257 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms