RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 SMCR8Q8TEV9 937 aaPredicted RBP9.74□□□□□ -0.85
VTI1B-206ENST00000556461 ARMC5Q96C12 935 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 TMOD4Q9NZQ9 345 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
VTI1B-206ENST00000556461 GABRQQ9UN88 632 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 POTEFA5A3E0 1075 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 C19orf81C9J6K1 198 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 MYCP01106 439 aaPredicted RBP9.73□□□□□ -0.85
VTI1B-206ENST00000556461 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
VTI1B-206ENST00000556461 PRKCZQ05513 592 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 PLEKHM2Q8IWE5 1019 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 SH3TC2Q8TF17 1288 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.73□□□□□ -0.85
VTI1B-206ENST00000556461 KIAA1683Q9H0B3 1180 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 TXNRD2Q9NNW7 524 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 CABP5Q9NP86 173 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 SRRDQ9UH36 339 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 SWAP70Q9UH65 585 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 PNMA3Q9UL41 463 aa9.73□□□□□ -0.85
VTI1B-206ENST00000556461 KIAA0100Q14667 2235 aaKnown RBP9.72□□□□□ -0.85
VTI1B-206ENST00000556461 MINDY4BA8MYZ0 360 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
VTI1B-206ENST00000556461 VCAM1P19320 739 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 PDE4AP27815 886 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 FCGRTP55899 365 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 HERVK_113P62684 666 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
VTI1B-206ENST00000556461 PABPC4Q13310 644 aaKnown RBP eCLIP9.72□□□□□ -0.854e-8■■■□□ 16.8
VTI1B-206ENST00000556461 ARHGEF6Q15052 776 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 FAM110CQ1W6H9 321 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 Q3C1V9 767 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 VPS53Q5VIR6 699 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 GIMAP6Q6P9H5 292 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 IFNL3Q8IZI9 196 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 EVI5LQ96CN4 794 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 ZNF333Q96JL9 665 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 C12orf42Q96LP6 360 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 FAM227BQ96M60 508 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 FEZ1Q99689 392 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 RBPJLQ9UBG7 517 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 ARPP21Q9UBL0 812 aaPredicted RBP9.72□□□□□ -0.85
VTI1B-206ENST00000556461 MYPNQ86TC9 1320 aa9.72□□□□□ -0.85
VTI1B-206ENST00000556461 A0A0D9SFI3 127 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 PRDM1O75626 825 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 CNMDO75829 334 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 GNRH1P01148 92 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 APPP05067 770 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 RASA1P20936 1047 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 GCLCP48506 637 aaPredicted RBP9.71□□□□□ -0.86
VTI1B-206ENST00000556461 TDO2P48775 406 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 SLC9C1Q4G0N8 1177 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 CATSPERGQ6ZRH7 1159 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 TMEM179Q6ZVK1 233 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 RPAP3Q9H6T3 665 aaPredicted RBP9.71□□□□□ -0.86
VTI1B-206ENST00000556461 MORF4L1Q9UBU8 362 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 TACC3Q9Y6A5 838 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 ROBO3Q96MS0 1386 aa9.71□□□□□ -0.86
VTI1B-206ENST00000556461 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 TNPO2O14787 897 aaKnown RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 EEF2P13639 858 aaKnown RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 GNAT2P19087 354 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 HOXD10P28358 340 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 FLT3LGP49771 235 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP14P54578 494 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 PRMT2P55345 433 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 ICA1Q05084 483 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 MTFR1Q15390 333 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 LRRFIP1Q32MZ4 808 aaKnown RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
VTI1B-206ENST00000556461 AMOTL1Q8IY63 956 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 RAET1EQ8TD07 263 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 RILPL2Q969X0 211 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 CCDC17Q96LX7 622 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 PAGR1Q9BTK6 254 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 PORCNQ9H237 461 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 OSBPL3Q9H4L5 887 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 INCENPQ9NQS7 918 aa9.7□□□□□ -0.86
VTI1B-206ENST00000556461 ELNP15502 786 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 GRK4P32298 578 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 ERVK-9P63128 1117 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 ERVK-24P63145 666 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 DOCK3Q8IZD9 2030 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 SPICE1Q8N0Z3 855 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 MKNK2Q9HBH9 465 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms