RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 WNK4Q96J92 1243 aa20.27■□□□□ 0.84
ITGA5-213ENST00000553071 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
ITGA5-213ENST00000553071 NEDD4P46934 1319 aa20.27■□□□□ 0.83
ITGA5-213ENST00000553071 SIPA1L1O43166 1804 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 USP17L10C9JJH3 530 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 TTLL1O95922 423 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 SLC10A3P09131 477 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 GTF2A2P52657 109 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 NOGQ13253 232 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 SNAPC2Q13487 334 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 TMTC2Q8N394 836 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 TM6SF1Q9BZW5 370 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 MTMR4Q9NYA4 1195 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 AFG3L2Q9Y4W6 797 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
ITGA5-213ENST00000553071 IGKV6D-41A0A0C4DH26 115 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 GUCY1A2P33402 732 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 DHX32Q7L7V1 743 aaKnown RBP20.25■□□□□ 0.83
ITGA5-213ENST00000553071 RASAL3Q86YV0 1011 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 MKL1Q969V6 931 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 TMEM87BQ96K49 555 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 C22orf23Q9BZE7 217 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
ITGA5-213ENST00000553071 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
ITGA5-213ENST00000553071 MANSC4A6NHS7 340 aaPredicted RBP20.24■□□□□ 0.83
ITGA5-213ENST00000553071 IRF6O14896 467 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 CETPP11597 493 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 BACE1P56817 501 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 JAG1P78504 1218 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 SPP2Q13103 211 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 STOX1Q6ZVD7 989 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 FASTKD5Q7L8L6 764 aaKnown RBP20.24■□□□□ 0.83
ITGA5-213ENST00000553071 CEP95Q96GE4 821 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 CAPNS2Q96L46 248 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 ZSCAN10Q96SZ4 725 aaPredicted RBP20.24■□□□□ 0.83
ITGA5-213ENST00000553071 FEZ1Q99689 392 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
ITGA5-213ENST00000553071 KIAA1683Q9H0B3 1180 aa20.24■□□□□ 0.83
ITGA5-213ENST00000553071 EEF2P13639 858 aaKnown RBP20.23■□□□□ 0.83
ITGA5-213ENST00000553071 MAP2K2P36507 400 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 NOVP48745 357 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 ATP2B2Q01814 1243 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 USP17L2Q6R6M4 530 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 MB21D2Q8IYB1 491 aaPredicted RBP20.23■□□□□ 0.83
ITGA5-213ENST00000553071 ANKS1AQ92625 1134 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 JAKMIP1Q96N16 626 aaKnown RBP20.23■□□□□ 0.83
ITGA5-213ENST00000553071 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 CLIP2Q9UDT6 1046 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 STX8Q9UNK0 236 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 TMX2Q9Y320 296 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 LAMA4Q16363 1823 aa20.23■□□□□ 0.83
ITGA5-213ENST00000553071 TRIM75PA6NK02 468 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
ITGA5-213ENST00000553071 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
ITGA5-213ENST00000553071 RBM25P49756 843 aaKnown RBP20.22■□□□□ 0.83
ITGA5-213ENST00000553071 SREBF2Q12772 1141 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 SH3D19Q5HYK7 790 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 OTUD7BQ6GQQ9 843 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 LPAR1Q92633 364 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 GOPCQ9HD26 462 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 IL17RBQ9NRM6 502 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 CYP46A1Q9Y6A2 500 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
ITGA5-213ENST00000553071 FAM155AB1AL88 458 aaPredicted RBP20.21■□□□□ 0.83
ITGA5-213ENST00000553071 PRC1O43663 620 aa20.21■□□□□ 0.83
ITGA5-213ENST00000553071 CYP4F22Q6NT55 531 aa20.21■□□□□ 0.83
ITGA5-213ENST00000553071 PROCA1Q8NCQ7 364 aaPredicted RBP20.21■□□□□ 0.83
ITGA5-213ENST00000553071 ZSWIM6Q9HCJ5 1215 aa20.21■□□□□ 0.83
ITGA5-213ENST00000553071 A0A0G2JLL6 359 aaPredicted RBP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 FGD1P98174 961 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 PABPC4Q13310 644 aaKnown RBP eCLIP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 SHROOM1Q2M3G4 852 aaPredicted RBP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 IFIT1BQ5T764 474 aaKnown RBP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 RUFY3Q7L099 469 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 CYB5R4Q7L1T6 521 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 PRRT2Q7Z6L0 340 aaPredicted RBP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 SIAH1Q8IUQ4 282 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 KAT14Q9H8E8 782 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 TNKSO95271 1327 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 WDR33Q9C0J8 1336 aaKnown RBP20.2■□□□□ 0.82
ITGA5-213ENST00000553071 DOCK1Q14185 1865 aa20.2■□□□□ 0.82
ITGA5-213ENST00000553071 TESPA1A2RU30 521 aaPredicted RBP20.19■□□□□ 0.82
ITGA5-213ENST00000553071 LIFRP42702 1097 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
ITGA5-213ENST00000553071 GRM1Q13255 1194 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 MTMR2Q13614 643 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 WTAPQ15007 396 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 TMEM67Q5HYA8 995 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 GMCL1P1Q8NEA9 526 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 VCPKMTQ9H867 229 aa20.19■□□□□ 0.82
ITGA5-213ENST00000553071 MYH8P13535 1937 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms