RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 USP14P54578 494 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 HERVK_113P62684 666 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
LINC00661-203ENST00000549131 ANKRD45Q5TZF3 282 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 ACER1Q8TDN7 264 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 FSD1Q9BTV5 496 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
LINC00661-203ENST00000549131 USP17L12C9JPN9 530 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L21D6R901 530 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 GUCY1A2P33402 732 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 LRRFIP1Q32MZ4 808 aaKnown RBP17.64■□□□□ 0.41
LINC00661-203ENST00000549131 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 COA7Q96BR5 231 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 C12orf42Q96LP6 360 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 KIAA1683Q9H0B3 1180 aa17.64■□□□□ 0.41
LINC00661-203ENST00000549131 ARPP21Q9UBL0 812 aaPredicted RBP17.64■□□□□ 0.41
LINC00661-203ENST00000549131 BIN2Q9UBW5 565 aaPredicted RBP17.64■□□□□ 0.41
LINC00661-203ENST00000549131 SMIM22K7EJ46 135 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 GPAA1O43292 621 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 VCAM1P19320 739 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 FLT3LGP49771 235 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 AAMPQ13685 434 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 TMEM179Q6ZVK1 233 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 SLAIN1Q8ND83 568 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 OSBP2Q969R2 916 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 STRBPQ96SI9 672 aaKnown RBP17.63■□□□□ 0.41
LINC00661-203ENST00000549131 P2RX7Q99572 595 aaKnown RBP17.63■□□□□ 0.41
LINC00661-203ENST00000549131 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 SALL3Q9BXA9 1300 aa17.63■□□□□ 0.41
LINC00661-203ENST00000549131 RLFQ13129 1914 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 MKI67P46013 3256 aaKnown RBP17.62■□□□□ 0.41
LINC00661-203ENST00000549131 M0R2C6 588 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 ADCY3O60266 1144 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 PEX10O60683 326 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 AKR1B1P15121 316 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 EN2P19622 333 aaPredicted RBP17.62■□□□□ 0.41
LINC00661-203ENST00000549131 CTR9Q6PD62 1173 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 C16orf86Q6ZW13 317 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 CLEC10AQ8IUN9 316 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 MORF4L1Q9UBU8 362 aa17.62■□□□□ 0.41
LINC00661-203ENST00000549131 COL11A1P12107 1806 aaPredicted RBP17.62■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 ELNP15502 786 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 TDO2P48775 406 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 CDK8P49336 464 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 UBXN2AP68543 259 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 ICA1Q05084 483 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 MTFR1Q15390 333 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
LINC00661-203ENST00000549131 TXNRD2Q9NNW7 524 aa17.61■□□□□ 0.41
LINC00661-203ENST00000549131 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
LINC00661-203ENST00000549131 GNAT2P19087 354 aa17.6■□□□□ 0.41
LINC00661-203ENST00000549131 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
LINC00661-203ENST00000549131 RPAP3Q9H6T3 665 aaPredicted RBP17.6■□□□□ 0.41
LINC00661-203ENST00000549131 ARHGEF10LQ9HCE6 1279 aa17.6■□□□□ 0.41
LINC00661-203ENST00000549131 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
LINC00661-203ENST00000549131 ROBO3Q96MS0 1386 aa17.6■□□□□ 0.41
LINC00661-203ENST00000549131 A0A1W2PRG0 241 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 APPP05067 770 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 ERVK-9P63128 1117 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 ERVK-24P63145 666 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 IRF5Q13568 498 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 GIMAP6Q6P9H5 292 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
LINC00661-203ENST00000549131 STK11IPQ8N1F8 1099 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 CCDC17Q96LX7 622 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 SEC62Q99442 399 aaKnown RBP17.59■□□□□ 0.41
LINC00661-203ENST00000549131 TANGO6Q9C0B7 1094 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 RWDD1Q9H446 243 aaPredicted RBP17.59■□□□□ 0.41
LINC00661-203ENST00000549131 SH2D4AQ9H788 454 aa17.59■□□□□ 0.41
LINC00661-203ENST00000549131 INHAP05111 366 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 CCL5P13501 91 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 PDE1AP54750 535 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 ATP2B2Q01814 1243 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 B4GALNT3Q6L9W6 998 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 CATSPERGQ6ZRH7 1159 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 PXYLP1Q8TE99 480 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
LINC00661-203ENST00000549131 RBPJLQ9UBG7 517 aa17.58■□□□□ 0.4
LINC00661-203ENST00000549131 MAPK4P31152 587 aa17.57■□□□□ 0.4
LINC00661-203ENST00000549131 SBK1Q52WX2 424 aa17.57■□□□□ 0.4
LINC00661-203ENST00000549131 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
LINC00661-203ENST00000549131 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
LINC00661-203ENST00000549131 RNF208Q9H0X6 261 aa17.57■□□□□ 0.4
LINC00661-203ENST00000549131 STAP2Q9UGK3 403 aa17.57■□□□□ 0.4
LINC00661-203ENST00000549131 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
LINC00661-203ENST00000549131 SPDYE16A6NNV3 312 aaPredicted RBP17.56■□□□□ 0.4
LINC00661-203ENST00000549131 SMC5Q8IY18 1101 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms