RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PF4P02776 101 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 GARTP22102 1010 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 CDKAL1Q5VV42 579 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 LCNL1Q6ZST4 164 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 TMEM74Q96NL1 305 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 DPH2Q9BQC3 489 aaPredicted RBP7.45□□□□□ -1.22
CCDC38-206ENST00000548771 CEP131Q9UPN4 1083 aa7.45□□□□□ -1.22
CCDC38-206ENST00000548771 ZNF503-AS2A6NEH8 195 aa7.44□□□□□ -1.22
CCDC38-206ENST00000548771 FAM155AB1AL88 458 aaPredicted RBP7.44□□□□□ -1.22
CCDC38-206ENST00000548771 H3BS24 57 aa7.44□□□□□ -1.22
CCDC38-206ENST00000548771 F13A1P00488 732 aa7.44□□□□□ -1.22
CCDC38-206ENST00000548771 CYP7A1P22680 504 aa7.44□□□□□ -1.22
CCDC38-206ENST00000548771 MLANAQ16655 118 aa7.44□□□□□ -1.22
CCDC38-206ENST00000548771 C1QL4Q86Z23 238 aa7.44□□□□□ -1.22
CCDC38-206ENST00000548771 PIWIL2Q8TC59 973 aaKnown RBP7.44□□□□□ -1.22
CCDC38-206ENST00000548771 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
CCDC38-206ENST00000548771 CARS2Q9HA77 564 aaKnown RBP7.44□□□□□ -1.22
CCDC38-206ENST00000548771 UPK3BL1B0FP48 263 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
CCDC38-206ENST00000548771 UPK3BL2E5RIL1 263 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 CBX7O95931 251 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 SRFP11831 508 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 FYB2Q5VWT5 728 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 DUSP15Q9H1R2 295 aaPredicted RBP7.43□□□□□ -1.22
CCDC38-206ENST00000548771 KCNQ5Q9NR82 932 aa7.43□□□□□ -1.22
CCDC38-206ENST00000548771 F6X3S4 739 aa7.42□□□□□ -1.22
CCDC38-206ENST00000548771 ESR1P03372 595 aa7.42□□□□□ -1.22
CCDC38-206ENST00000548771 ERMP1Q7Z2K6 904 aa7.42□□□□□ -1.22
CCDC38-206ENST00000548771 SLFN12Q8IYM2 578 aa7.42□□□□□ -1.22
CCDC38-206ENST00000548771 UBE2FQ969M7 185 aa7.42□□□□□ -1.22
CCDC38-206ENST00000548771 LIN37Q96GY3 246 aaPredicted RBP7.42□□□□□ -1.22
CCDC38-206ENST00000548771 POLR3KQ9Y2Y1 108 aaPredicted RBP7.42□□□□□ -1.22
CCDC38-206ENST00000548771 PLCG1P19174 1290 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 GDNFP39905 211 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 ETV3P41162 512 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 GAB4Q2WGN9 574 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 LILRA6Q6PI73 481 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 ZSWIM9Q86XI8 627 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 RELL1Q8IUW5 271 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 CYB5D2Q8WUJ1 264 aa7.41□□□□□ -1.22
CCDC38-206ENST00000548771 GBP2P32456 591 aaPredicted RBP7.4□□□□□ -1.22
CCDC38-206ENST00000548771 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
CCDC38-206ENST00000548771 PWP1Q13610 501 aa7.4□□□□□ -1.22
CCDC38-206ENST00000548771 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
CCDC38-206ENST00000548771 ZSWIM5Q9P217 1185 aa7.4□□□□□ -1.22
CCDC38-206ENST00000548771 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.22
CCDC38-206ENST00000548771 WASH4PA8MWX3 477 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 GREM1O60565 184 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 DNAJA2O60884 412 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 AFMP43652 599 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 MPP2Q14168 576 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
CCDC38-206ENST00000548771 TMPRSS7Q7RTY8 843 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 LRRC56Q8IYG6 542 aaPredicted RBP7.39□□□□□ -1.23
CCDC38-206ENST00000548771 VWCEQ96DN2 955 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 GPR62Q9BZJ7 368 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 REV1Q9UBZ9 1251 aa7.39□□□□□ -1.23
CCDC38-206ENST00000548771 CHURC1-FNTBB4DL54 471 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 KCNMB1Q16558 191 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 FAM13CQ8NE31 585 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 ALPK1Q96QP1 1244 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 LRRC3Q9BY71 257 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 MRS2Q9HD23 443 aa7.38□□□□□ -1.23
CCDC38-206ENST00000548771 ROBO2Q9HCK4 1378 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 NCANO14594 1321 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 PRRG2O14669 202 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 BPNT1O95861 308 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 BUD31P41223 144 aaPredicted RBP7.37□□□□□ -1.23
CCDC38-206ENST00000548771 YARSP54577 528 aaKnown RBP7.37□□□□□ -1.23
CCDC38-206ENST00000548771 FAM160A1Q05DH4 1040 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 REC114Q7Z4M0 266 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 DTWD2Q8NBA8 298 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 GOLM1Q8NBJ4 401 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 KBTBD4Q9NVX7 518 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 FAM53CQ9NYF3 392 aa7.37□□□□□ -1.23
CCDC38-206ENST00000548771 MINDY4BA8MYZ0 360 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 HTR3BO95264 441 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 GLI1P08151 1106 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 ITGAEP38570 1179 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 LDLRAD1Q5T700 205 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 PRR23BQ6ZRT6 265 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 BHLHE22Q8NFJ8 381 aaPredicted RBP7.36□□□□□ -1.23
CCDC38-206ENST00000548771 RNF141Q8WVD5 230 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 SP110Q9HB58 689 aa7.36□□□□□ -1.23
CCDC38-206ENST00000548771 DNAJC25-GNG10A0A024R161 153 aa7.35□□□□□ -1.23
CCDC38-206ENST00000548771 GRIN3BO60391 1043 aa7.35□□□□□ -1.23
CCDC38-206ENST00000548771 ZSCAN22P10073 491 aaPredicted RBP7.35□□□□□ -1.23
CCDC38-206ENST00000548771 TPP2P29144 1249 aaPredicted RBP7.35□□□□□ -1.23
CCDC38-206ENST00000548771 RALGPS1Q5JS13 557 aa7.35□□□□□ -1.23
CCDC38-206ENST00000548771 SYDE1Q6ZW31 735 aaPredicted RBP7.35□□□□□ -1.23
CCDC38-206ENST00000548771 TSPYL5Q86VY4 417 aaPredicted RBP7.35□□□□□ -1.23
CCDC38-206ENST00000548771 BAHD1Q8TBE0 780 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms