RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 CYB5R4Q7L1T6 521 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 SLC10A4Q96EP9 437 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 CEP95Q96GE4 821 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 UBAC1Q9BSL1 405 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.68□□□□□ -0.38
PAAF1-216ENST00000546039 KANSL2Q9H9L4 492 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 ELP3Q9H9T3 547 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 ZSWIM5Q9P217 1185 aa12.68□□□□□ -0.38
PAAF1-216ENST00000546039 ERICH2A1L162 156 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 PRC1O43663 620 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 TTLL1O95922 423 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 ANTXR2P58335 489 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 PPIL2Q13356 520 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
PAAF1-216ENST00000546039 TMEM87BQ96K49 555 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-216ENST00000546039 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 MTMR4Q9NYA4 1195 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 NYAP2Q9P242 653 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-216ENST00000546039 CYP46A1Q9Y6A2 500 aa12.67□□□□□ -0.38
PAAF1-216ENST00000546039 TNKSO95271 1327 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
PAAF1-216ENST00000546039 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 NOVP48745 357 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 RGMBQ6NW40 437 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 RUFY3Q7L099 469 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 DGKHQ86XP1 1220 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 RASAL3Q86YV0 1011 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 OPTNQ96CV9 577 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 WNK4Q96J92 1243 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 TTC14Q96N46 770 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 SYNPO2Q9UMS6 1093 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
PAAF1-216ENST00000546039 RLFQ13129 1914 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 NMT2O60551 498 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 SLC10A3P09131 477 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 EEF2P13639 858 aaKnown RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 ZNF157P51786 506 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 EXOSC10Q01780 885 aaKnown RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 WTAPQ15007 396 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 SEC23AQ15436 765 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 FEZ1Q99689 392 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-216ENST00000546039 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
PAAF1-216ENST00000546039 COL11A1P12107 1806 aaPredicted RBP12.65□□□□□ -0.39
PAAF1-216ENST00000546039 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
PAAF1-216ENST00000546039 CXCL11O14625 94 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
PAAF1-216ENST00000546039 USP14P54578 494 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 COL9A3Q14050 684 aaPredicted RBP12.64□□□□□ -0.39
PAAF1-216ENST00000546039 RABEP1Q15276 862 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
PAAF1-216ENST00000546039 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 MKL1Q969V6 931 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 CCDC102AQ96A19 550 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 KIF2CQ99661 725 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
PAAF1-216ENST00000546039 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 AFG3L2Q9Y4W6 797 aa12.64□□□□□ -0.39
PAAF1-216ENST00000546039 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 C19orf81C9J6K1 198 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 CPA1P15085 419 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 HSPA6P17066 643 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 GJA5P36382 358 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 LIFRP42702 1097 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 ECE1P42892 770 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 BACE1P56817 501 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 FGD1P98174 961 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 SPP2Q13103 211 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 MTMR2Q13614 643 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 DEFB115Q30KQ5 88 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
PAAF1-216ENST00000546039 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
PAAF1-216ENST00000546039 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms