RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NEK11Q8NG66 645 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 LPIN2Q92539 896 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 FERMT2Q96AC1 680 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
TDP1-204ENST00000545686 RNF26Q9BY78 433 aaPredicted RBP9.95□□□□□ -0.82
TDP1-204ENST00000545686 NACAP1Q9BZK3 213 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 GBP3Q9H0R5 595 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 CSRNP2Q9H175 543 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 EPC1Q9H2F5 836 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 RNF41Q9H4P4 317 aaPredicted RBP9.95□□□□□ -0.82
TDP1-204ENST00000545686 KCNJ14Q9UNX9 436 aa9.95□□□□□ -0.82
TDP1-204ENST00000545686 LAMB1P07942 1786 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 CTAGE9A4FU28 777 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 TRIM75PA6NK02 468 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 UBE2Q2LH0YL09 131 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 MBD4O95243 580 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 XBP1P17861 261 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 FGFR2P21802 821 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 RBL2Q08999 1139 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 RAD51AP2Q09MP3 1159 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 MTF1Q14872 753 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 GOLGA5Q8TBA6 731 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 ANKZF1Q9H8Y5 726 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 DISP2A7MBM2 1401 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 DUOX1Q9NRD9 1551 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 IL2RBP14784 551 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 BEND6Q5SZJ8 279 aaPredicted RBP9.94□□□□□ -0.82
TDP1-204ENST00000545686 TMTC1Q8IUR5 882 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 GRAMD1CQ8IYS0 662 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 SPATA5Q8NB90 893 aa9.94□□□□□ -0.82
TDP1-204ENST00000545686 PYM1Q9BRP8 204 aaKnown RBP9.94□□□□□ -0.82
TDP1-204ENST00000545686 BAZ2AQ9UIF9 1905 aaKnown RBP9.93□□□□□ -0.82
TDP1-204ENST00000545686 GSG1L2A8MUP6 293 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 TEX33O43247 280 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 STARD3NLO95772 234 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 PIP4K2BP78356 416 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 SPAG1Q07617 926 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 DPYDQ12882 1025 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 NR5A1Q13285 461 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 ZNF654Q8IZM8 581 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 LZTFL1Q9NQ48 299 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 XIRP1Q702N8 1843 aaKnown RBP9.93□□□□□ -0.82
TDP1-204ENST00000545686 PDE8AO60658 829 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 SLC5A1P13866 664 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 ZSCAN26Q16670 478 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 MAGEB6Q8N7X4 407 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 FANCBQ8NB91 859 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 PAGE5Q96GU1 130 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 NAPGQ99747 312 aaPredicted RBP9.93□□□□□ -0.82
TDP1-204ENST00000545686 CARD10Q9BWT7 1032 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 LIMA1Q9UHB6 759 aaKnown RBP9.93□□□□□ -0.82
TDP1-204ENST00000545686 ADAM21Q9UKJ8 722 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
TDP1-204ENST00000545686 TACC3Q9Y6A5 838 aa9.93□□□□□ -0.82
TDP1-204ENST00000545686 H3BQF6 201 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 IRS4O14654 1257 aaPredicted RBP9.92□□□□□ -0.82
TDP1-204ENST00000545686 GYPCP04921 128 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 CAPN2P17655 700 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 KRT2P35908 639 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 TDO2P48775 406 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 KIF4BQ2VIQ3 1234 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 ZNF569Q5MCW4 686 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 DDX17Q92841 729 aaKnown RBP9.92□□□□□ -0.82
TDP1-204ENST00000545686 IRX2Q9BZI1 471 aaPredicted RBP9.92□□□□□ -0.82
TDP1-204ENST00000545686 ZCCHC17Q9NP64 241 aaKnown RBP9.92□□□□□ -0.82
TDP1-204ENST00000545686 CABP5Q9NP86 173 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 PPP1R3GB7ZBB8 358 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 CD44P16070 742 aaKnown RBP9.92□□□□□ -0.82
TDP1-204ENST00000545686 AKAP17AQ02040 695 aaKnown RBP9.92□□□□□ -0.82
TDP1-204ENST00000545686 CYP26C1Q6V0L0 522 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 USP49Q70CQ1 688 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 PHF20Q9BVI0 1012 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 ARMT1Q9H993 441 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 INCENPQ9NQS7 918 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 TAOK2Q9UL54 1235 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 L1RE1Q9UN81 338 aa9.92□□□□□ -0.82
TDP1-204ENST00000545686 A0A087X0B3 334 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 CTAGE15A4D2H0 777 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 RPS6KA5O75582 802 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 IVLP07476 585 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 CTAGE8P0CG41 777 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 GTF2E1P29083 439 aaPredicted RBP9.91□□□□□ -0.82
TDP1-204ENST00000545686 CASP14P31944 242 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 CTAGE4Q8IX94 777 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 ANKRD20A12PQ8NF67 263 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 OXER1Q8TDS5 423 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
TDP1-204ENST00000545686 UBAC1Q9BSL1 405 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 BRMS1Q9HCU9 246 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 ANAPC4Q9UJX5 808 aa9.91□□□□□ -0.82
TDP1-204ENST00000545686 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms