RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 SHDQ96IW2 340 aa8.76□□□□□ -1.01
DDX47-211ENST00000544497 NBPF4Q96M43 638 aa8.76□□□□□ -1.01
DDX47-211ENST00000544497 PIF1Q9H611 641 aa8.76□□□□□ -1.01
DDX47-211ENST00000544497 PTPRGP23470 1445 aa8.76□□□□□ -1.01
DDX47-211ENST00000544497 CLCQ05315 142 aa8.75□□□□□ -1.01
DDX47-211ENST00000544497 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
DDX47-211ENST00000544497 CCDC86Q9H6F5 360 aaKnown RBP8.75□□□□□ -1.01
DDX47-211ENST00000544497 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
DDX47-211ENST00000544497 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
DDX47-211ENST00000544497 LEMD3Q9Y2U8 911 aa8.75□□□□□ -1.01
DDX47-211ENST00000544497 PCDHB14Q9Y5E9 798 aa8.75□□□□□ -1.01
DDX47-211ENST00000544497 SMAD7O15105 426 aaKnown RBP8.74□□□□□ -1.01
DDX47-211ENST00000544497 F13BP05160 661 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 CDK8P49336 464 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 NFE2L2Q16236 605 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 CPSF6Q16630 551 aaKnown RBP eCLIP8.74□□□□□ -1.01
DDX47-211ENST00000544497 MSMPQ1L6U9 139 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 TNNI3KQ59H18 835 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 WIPI1Q5MNZ9 446 aaPredicted RBP8.74□□□□□ -1.01
DDX47-211ENST00000544497 ABI1Q8IZP0 508 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 KRT82Q9NSB4 513 aa8.74□□□□□ -1.01
DDX47-211ENST00000544497 ANGEL1Q9UNK9 670 aaKnown RBP8.74□□□□□ -1.01
DDX47-211ENST00000544497 TMA7Q9Y2S6 64 aaKnown RBP8.74□□□□□ -1.01
DDX47-211ENST00000544497 ADAMTSL3P82987 1691 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 UHRF1BP1LA0JNW5 1464 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 IMPDH2P12268 514 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 LIG1P18858 919 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 RXRBP28702 533 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 NUTM2GQ5VZR2 741 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 SMG8Q8ND04 991 aaKnown RBP8.73□□□□□ -1.01
DDX47-211ENST00000544497 ELMO3Q96BJ8 720 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 MRFAP1L1Q96HT8 127 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 OSBPL1AQ9BXW6 950 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 TMPRSS13Q9BYE2 586 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 NRSN2Q9GZP1 204 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 ZNRF3Q9ULT6 936 aa8.73□□□□□ -1.01
DDX47-211ENST00000544497 POLR3KQ9Y2Y1 108 aaPredicted RBP8.73□□□□□ -1.01
DDX47-211ENST00000544497 ARID1BQ8NFD5 2236 aaPredicted RBP8.73□□□□□ -1.01
DDX47-211ENST00000544497 PCF11O94913 1555 aaKnown RBP8.73□□□□□ -1.01
DDX47-211ENST00000544497 TIAF1O95411 115 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 CTSBP07858 339 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 FOSL1P15407 271 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 GIPRP48546 466 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 FZD5Q13467 585 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 HDXQ7Z353 690 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 SUGCTQ9HAC7 445 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 CYP4F12Q9HCS2 524 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 SIRPGQ9P1W8 387 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 CDK11AQ9UQ88 783 aaPredicted RBP8.72□□□□□ -1.01
DDX47-211ENST00000544497 TNIKQ9UKE5 1360 aa8.72□□□□□ -1.01
DDX47-211ENST00000544497 PTPRMP28827 1452 aa8.71□□□□□ -1.01
DDX47-211ENST00000544497 KDM5BQ9UGL1 1544 aa8.71□□□□□ -1.01
DDX47-211ENST00000544497 KLF4O43474 513 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 ZNF862O60290 1169 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 RAB33AQ14088 237 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 INPP5AQ14642 412 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 HP1BP3Q5SSJ5 553 aaPredicted RBP8.71□□□□□ -1.02
DDX47-211ENST00000544497 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 FAM169BQ8N8A8 192 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 C12orf50Q8NA57 414 aaPredicted RBP8.71□□□□□ -1.02
DDX47-211ENST00000544497 OR6P1Q8NGX9 317 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 CACNA2D2Q9NY47 1150 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 CFAP43Q8NDM7 1665 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 DISP3Q9P2K9 1392 aa8.71□□□□□ -1.02
DDX47-211ENST00000544497 LOC100289279A0A1B0GTE1 492 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 CCDC85CA6NKD9 419 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 PRNPP04156 253 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
DDX47-211ENST00000544497 SERINC3Q13530 473 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 LSRQ86X29 649 aaPredicted RBP8.7□□□□□ -1.02
DDX47-211ENST00000544497 WDR89Q96FK6 387 aaPredicted RBP8.7□□□□□ -1.02
DDX47-211ENST00000544497 SRPK1Q96SB4 655 aaKnown RBP8.7□□□□□ -1.02
DDX47-211ENST00000544497 EHMT1Q9H9B1 1298 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 RAD18Q9NS91 495 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 ACTR10Q9NZ32 417 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 SNCAIPQ9Y6H5 919 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 UACAQ9BZF9 1416 aa8.7□□□□□ -1.02
DDX47-211ENST00000544497 IQGAP2Q13576 1575 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 MADDQ8WXG6 1647 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 FAM95CA0A1B0GW59 222 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 PRAMEF27A3QJZ7 478 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 DCDC2CA8MYV0 355 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 PAOXQ6QHF9 649 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 VSIG10LQ86VR7 867 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 METTL22Q9BUU2 404 aaPredicted RBP8.69□□□□□ -1.02
DDX47-211ENST00000544497 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 CORINQ9Y5Q5 1042 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 CSADQ9Y600 493 aa8.69□□□□□ -1.02
DDX47-211ENST00000544497 TLDC2A0PJX2 215 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 GFRA2O00451 464 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 ATE1O95260 518 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 HTR3BO95264 441 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 MLECQ14165 292 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
DDX47-211ENST00000544497 FBXL18Q96ME1 805 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms