RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 POU5F2Q8N7G0 328 aa8.39□□□□□ -1.07
XRCC4-206ENST00000542685 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
XRCC4-206ENST00000542685 RHOVQ96L33 236 aa8.39□□□□□ -1.07
XRCC4-206ENST00000542685 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
XRCC4-206ENST00000542685 EIF5BO60841 1220 aaKnown RBP8.38□□□□□ -1.07
XRCC4-206ENST00000542685 ITGAEP38570 1179 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 PWP1Q13610 501 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 SNAP47Q5SQN1 464 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 GOLM1Q8NBJ4 401 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 DNAJB8Q8NHS0 232 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 CEP131Q9UPN4 1083 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 CTNND2Q9UQB3 1225 aa8.38□□□□□ -1.07
XRCC4-206ENST00000542685 RB1CC1Q8TDY2 1594 aa8.37□□□□□ -1.07
XRCC4-206ENST00000542685 GRIN3BO60391 1043 aa8.37□□□□□ -1.07
XRCC4-206ENST00000542685 YARSP54577 528 aaKnown RBP8.37□□□□□ -1.07
XRCC4-206ENST00000542685 ZNF648Q5T619 568 aaPredicted RBP8.37□□□□□ -1.07
XRCC4-206ENST00000542685 ERICH6BQ5W0A0 696 aa8.37□□□□□ -1.07
XRCC4-206ENST00000542685 TMEM40Q8WWA1 233 aa8.37□□□□□ -1.07
XRCC4-206ENST00000542685 C8AP07357 584 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 KCNMB1Q16558 191 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 ZSWIM9Q86XI8 627 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 PPP1R13LQ8WUF5 828 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 CYB5D2Q8WUJ1 264 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 COPRSQ9NQ92 184 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 KBTBD4Q9NVX7 518 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 REV1Q9UBZ9 1251 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 KLHL3Q9UH77 587 aa8.36□□□□□ -1.07
XRCC4-206ENST00000542685 WASH4PA8MWX3 477 aa8.35□□□□□ -1.07
XRCC4-206ENST00000542685 TMEM201Q5SNT2 666 aa8.35□□□□□ -1.07
XRCC4-206ENST00000542685 FYB2Q5VWT5 728 aa8.35□□□□□ -1.07
XRCC4-206ENST00000542685 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
XRCC4-206ENST00000542685 FBXO27Q8NI29 283 aa8.35□□□□□ -1.07
XRCC4-206ENST00000542685 PIWIL2Q8TC59 973 aaKnown RBP8.35□□□□□ -1.07
XRCC4-206ENST00000542685 Q96M66 194 aa8.35□□□□□ -1.07
XRCC4-206ENST00000542685 POLR3KQ9Y2Y1 108 aaPredicted RBP8.35□□□□□ -1.07
XRCC4-206ENST00000542685 TLR3O15455 904 aaKnown RBP8.34□□□□□ -1.07
XRCC4-206ENST00000542685 AFMP43652 599 aa8.34□□□□□ -1.07
XRCC4-206ENST00000542685 TNNI2P48788 182 aa8.34□□□□□ -1.07
XRCC4-206ENST00000542685 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.07
XRCC4-206ENST00000542685 SLAMF8Q9P0V8 285 aa8.34□□□□□ -1.07
XRCC4-206ENST00000542685 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 CHURC1-FNTBB4DL54 471 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 HTR3BO95264 441 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 MPP2Q14168 576 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 REC114Q7Z4M0 266 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 SLFN12Q8IYM2 578 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 C19orf73Q9NVV2 129 aa8.33□□□□□ -1.08
XRCC4-206ENST00000542685 LRRC10BA6NIK2 292 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 GARTP22102 1010 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 FBXL19Q6PCT2 694 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 TMPRSS7Q7RTY8 843 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 ERMP1Q7Z2K6 904 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 CREG2Q8IUH2 290 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 KIRREL1Q96J84 757 aa8.32□□□□□ -1.08
XRCC4-206ENST00000542685 DUSP15Q9H1R2 295 aaPredicted RBP8.32□□□□□ -1.08
XRCC4-206ENST00000542685 ZNF503-AS2A6NEH8 195 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 BTBD11A6QL63 1104 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 LRRN2O75325 713 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 FARP2O94887 1054 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-206ENST00000542685 ESR1P03372 595 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 TPP2P29144 1249 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-206ENST00000542685 GDNFP39905 211 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 PHACTR4Q8IZ21 702 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 DTWD2Q8NBA8 298 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 BAHD1Q8TBE0 780 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-206ENST00000542685 LIN37Q96GY3 246 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-206ENST00000542685 TRIT1Q9H3H1 467 aaKnown RBP8.31□□□□□ -1.08
XRCC4-206ENST00000542685 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.31□□□□□ -1.08
XRCC4-206ENST00000542685 KCNH3Q9ULD8 1083 aa8.31□□□□□ -1.08
XRCC4-206ENST00000542685 DNAJC25-GNG10A0A024R161 153 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 DNAJA2O60884 412 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
XRCC4-206ENST00000542685 ZNF124Q15973 351 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 MLANAQ16655 118 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
XRCC4-206ENST00000542685 RALGPS1Q5JS13 557 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 TTC6Q86TZ1 520 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 CCDC120Q96HB5 630 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 CCDC74BQ96LY2 380 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 GGT7Q9UJ14 662 aa8.3□□□□□ -1.08
XRCC4-206ENST00000542685 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 MPZL3Q6UWV2 235 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 KSR1Q8IVT5 923 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 RNF141Q8WVD5 230 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 KIF2CQ99661 725 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 FAM53CQ9NYF3 392 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 DUSP13Q9UII6 198 aa8.29□□□□□ -1.08
XRCC4-206ENST00000542685 SUPT16HQ9Y5B9 1047 aaKnown RBP8.29□□□□□ -1.08
XRCC4-206ENST00000542685 GLI1P08151 1106 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 HK2P52789 917 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 MRPL58Q14197 206 aaKnown RBP8.28□□□□□ -1.08
XRCC4-206ENST00000542685 HS2ST1Q7LGA3 356 aa8.28□□□□□ -1.08
XRCC4-206ENST00000542685 KREMEN1Q96MU8 473 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms