RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 GRB14Q14449 540 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 GORABQ5T7V8 394 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 DPP9Q86TI2 863 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
CLPB-208ENST00000538021 TGFBRAP1Q8WUH2 860 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 FERMT2Q96AC1 680 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 FEZ1Q99689 392 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 COPRSQ9NQ92 184 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 LRP2BPQ9P2M1 347 aa13.74□□□□□ -0.21
CLPB-208ENST00000538021 BAG3O95817 575 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 HOXC6P09630 235 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 CYBAP13498 195 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 ADCYAP1R1P41586 468 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 TFCP2Q12800 502 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 FAM122AQ96E09 287 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 PALD1Q9ULE6 856 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
CLPB-208ENST00000538021 FLT1P17948 1338 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 GH2P01242 217 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 PLA2G5P39877 138 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 EPHB4P54760 987 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 TLE2Q04725 743 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 SNX17Q15036 470 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 BTBD7Q9P203 1132 aa13.72□□□□□ -0.21
CLPB-208ENST00000538021 SAP30BPQ9UHR5 308 aaKnown RBP13.72□□□□□ -0.21
CLPB-208ENST00000538021 SEPT4O43236 478 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 HLA-DOAP06340 250 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 PLCG2P16885 1265 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 DNAJB2P25686 324 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 ITGB8P26012 769 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 NAA16Q6N069 864 aaPredicted RBP13.71□□□□□ -0.21
CLPB-208ENST00000538021 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
CLPB-208ENST00000538021 C12orf42Q96LP6 360 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
CLPB-208ENST00000538021 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.7□□□□□ -0.22
CLPB-208ENST00000538021 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.7□□□□□ -0.22
CLPB-208ENST00000538021 CLTBP09497 229 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 RAG1P15918 1043 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 VCAM1P19320 739 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 ADORA2AP29274 412 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 USP14P54578 494 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 LRRC41Q15345 812 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 PRAMEF19Q5SWL8 479 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 TIFAQ96CG3 184 aa13.7□□□□□ -0.22
CLPB-208ENST00000538021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.7□□□□□ -0.22
CLPB-208ENST00000538021 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
CLPB-208ENST00000538021 PQBP1O60828 265 aaKnown RBP13.69□□□□□ -0.22
CLPB-208ENST00000538021 ARID4AP29374 1257 aaPredicted RBP13.69□□□□□ -0.22
CLPB-208ENST00000538021 MCAMP43121 646 aa13.69□□□□□ -0.22
CLPB-208ENST00000538021 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
CLPB-208ENST00000538021 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
CLPB-208ENST00000538021 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
CLPB-208ENST00000538021 ADAMTS19Q8TE59 1207 aa13.69□□□□□ -0.22
CLPB-208ENST00000538021 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
CLPB-208ENST00000538021 GAS2L1Q99501 681 aaPredicted RBP13.69□□□□□ -0.22
CLPB-208ENST00000538021 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
CLPB-208ENST00000538021 SRGAP3O43295 1099 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 IGHA2P01877 340 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 PPP4CP60510 307 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 FPGSQ05932 587 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 ADGRA1Q86SQ6 560 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 ASB2Q96Q27 587 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 UHRF1Q96T88 793 aaPredicted RBP13.68□□□□□ -0.22
CLPB-208ENST00000538021 MOV10L1Q9BXT6 1211 aaKnown RBP13.68□□□□□ -0.22
CLPB-208ENST00000538021 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 TMEM39AQ9NV64 488 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 THEGQ9P2T0 379 aa13.68□□□□□ -0.22
CLPB-208ENST00000538021 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 STRNO43815 780 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 COBLO75128 1261 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 UQCRFS1P1P0C7P4 283 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 CCDC85BQ15834 202 aaPredicted RBP13.67□□□□□ -0.22
CLPB-208ENST00000538021 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 MEIS3Q99687 375 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 XIRP2A4UGR9 3374 aa13.67□□□□□ -0.22
CLPB-208ENST00000538021 ERCC3P19447 782 aa13.66□□□□□ -0.22
CLPB-208ENST00000538021 MRPS5P82675 430 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms