RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CD33P20138 364 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 EPHX2P34913 555 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 CASP7P55210 303 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 GPSM2P81274 684 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 TTLL11Q8NHH1 800 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 CDC5LQ99459 802 aaKnown RBP8.93□□□□□ -0.98
YBX3-206ENST00000536823 PLA2G12BQ9BX93 195 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 ZNRF3Q9ULT6 936 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 GJA3Q9Y6H8 435 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 SPEF2Q9C093 1822 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 F6X3S4 739 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 HYAL3O43820 417 aaPredicted RBP8.92□□□□□ -0.98
YBX3-206ENST00000536823 LMOD1P29536 600 aaPredicted RBP8.92□□□□□ -0.98
YBX3-206ENST00000536823 SCNN1DP51172 638 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 PCBP4P57723 403 aaKnown RBP8.92□□□□□ -0.98
YBX3-206ENST00000536823 MCCD1P59942 119 aaPredicted RBP8.92□□□□□ -0.98
YBX3-206ENST00000536823 CXCL9Q07325 125 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 SLFN5Q08AF3 891 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 EAPPQ56P03 285 aaPredicted RBP8.92□□□□□ -0.98
YBX3-206ENST00000536823 BEND3Q5T5X7 828 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 TBC1D9Q6ZT07 1266 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 NLRP8Q86W28 1048 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 ANKRD18AQ8IVF6 992 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 CCDC85AQ96PX6 553 aaPredicted RBP8.92□□□□□ -0.98
YBX3-206ENST00000536823 EYA3Q99504 573 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 GREM2Q9H772 168 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 POLLQ9UGP5 575 aa8.92□□□□□ -0.98
YBX3-206ENST00000536823 XDHP47989 1333 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 YDJCA8MPS7 323 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 UFL1O94874 794 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 MYCP01106 439 aaPredicted RBP8.91□□□□□ -0.98
YBX3-206ENST00000536823 MAPTP10636 758 aaKnown RBP8.91□□□□□ -0.98
YBX3-206ENST00000536823 HTRA3P83110 453 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 WASHC4Q2M389 1173 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 CIAPIN1Q6FI81 312 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 PNMA8AQ86V59 439 aaPredicted RBP8.91□□□□□ -0.98
YBX3-206ENST00000536823 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 TBC1D16Q8TBP0 767 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 NACC1Q96RE7 527 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 GDPD2Q9HCC8 539 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 NDUFB9Q9Y6M9 179 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 SCN9AQ15858 1988 aa8.91□□□□□ -0.98
YBX3-206ENST00000536823 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 ECE2O60344 883 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 GPR37L1O60883 481 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 ALDH1L1O75891 902 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 RAD17O75943 681 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 EPS15P42566 896 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 GMPSP49915 693 aaPredicted RBP8.9□□□□□ -0.98
YBX3-206ENST00000536823 TNIP1Q15025 636 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 ZNF592Q92610 1267 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 GPR101Q96P66 508 aaPredicted RBP8.9□□□□□ -0.98
YBX3-206ENST00000536823 C1orf115Q9H7X2 142 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 DBNDD1Q9H9R9 158 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 BSDC1Q9NW68 430 aaPredicted RBP8.9□□□□□ -0.98
YBX3-206ENST00000536823 GPRC5DQ9NZD1 345 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 ANKIB1Q9P2G1 1089 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 HCN2Q9UL51 889 aa8.9□□□□□ -0.98
YBX3-206ENST00000536823 PTPRCP08575 1304 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 PASKQ96RG2 1323 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 GRM8O00222 908 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 CSF1RP07333 972 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 ATP2B4P23634 1241 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 TNP2Q05952 138 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 ZNF468Q5VIY5 522 aaPredicted RBP8.89□□□□□ -0.99
YBX3-206ENST00000536823 USP50Q70EL3 339 aaPredicted RBP8.89□□□□□ -0.99
YBX3-206ENST00000536823 TRMT2AQ8IZ69 625 aaKnown RBP8.89□□□□□ -0.99
YBX3-206ENST00000536823 SSH1Q8WYL5 1049 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 ADARB2Q9NS39 739 aaKnown RBP8.89□□□□□ -0.99
YBX3-206ENST00000536823 PSME4Q14997 1843 aa8.89□□□□□ -0.99
YBX3-206ENST00000536823 ZNF609O15014 1411 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 MED23Q9ULK4 1368 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 PSMD14O00487 310 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 KHNYNO15037 678 aaKnown RBP8.88□□□□□ -0.99
YBX3-206ENST00000536823 H2AFB1P0C5Y9 115 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 H2AFB2P0C5Z0 115 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 ATP4AP20648 1035 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
YBX3-206ENST00000536823 FOXO4P98177 505 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 ALDH1L2Q3SY69 923 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 MAP1SQ66K74 1059 aaPredicted RBP8.88□□□□□ -0.99
YBX3-206ENST00000536823 SLC4A10Q6U841 1118 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 C1orf216Q8TAB5 229 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 BCL2L13Q9BXK5 485 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
YBX3-206ENST00000536823 SRCIN1Q9C0H9 1055 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 PRR12Q9ULL5 1215 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 MINPP1Q9UNW1 487 aa8.88□□□□□ -0.99
YBX3-206ENST00000536823 A0A1B0GUL6 1792 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 ELOA3CA0A087WX78 387 aaPredicted RBP8.87□□□□□ -0.99
YBX3-206ENST00000536823 ELOA3DA6NLF2 546 aaPredicted RBP8.87□□□□□ -0.99
YBX3-206ENST00000536823 CT47B1P0C2W7 299 aaPredicted RBP8.87□□□□□ -0.99
YBX3-206ENST00000536823 ALAS2P22557 587 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 RPS12P25398 132 aaKnown RBP8.87□□□□□ -0.99
YBX3-206ENST00000536823 CCT4P50991 539 aaKnown RBP8.87□□□□□ -0.99
YBX3-206ENST00000536823 TLR1Q15399 786 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 ELOA3BQ3SY89 546 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms