RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CCDC129Q6ZRS4 1044 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
UBE3B-206ENST00000536398 BRCA2P51587 3418 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.33
UBE3B-206ENST00000536398 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 FEZ1Q99689 392 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 GABRQQ9UN88 632 aa17.11■□□□□ 0.33
UBE3B-206ENST00000536398 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
UBE3B-206ENST00000536398 APPP05067 770 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 FCGRTP55899 365 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
UBE3B-206ENST00000536398 PRKCZQ05513 592 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 LRRFIP1Q32MZ4 808 aaKnown RBP17.1■□□□□ 0.33
UBE3B-206ENST00000536398 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 GIMAP6Q6P9H5 292 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 AMOTL1Q8IY63 956 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 KIAA1683Q9H0B3 1180 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 TXNRD2Q9NNW7 524 aa17.1■□□□□ 0.33
UBE3B-206ENST00000536398 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
UBE3B-206ENST00000536398 MYCP01106 439 aaPredicted RBP17.09■□□□□ 0.33
UBE3B-206ENST00000536398 GNRH1P01148 92 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 HERVK_113P62684 666 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 C12orf42Q96LP6 360 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 MYPNQ86TC9 1320 aa17.09■□□□□ 0.33
UBE3B-206ENST00000536398 POTEFA5A3E0 1075 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 FOXP2O15409 715 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 GNAT2P19087 354 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 VCAM1P19320 739 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 HOXD10P28358 340 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 GCLCP48506 637 aaPredicted RBP17.08■□□□□ 0.32
UBE3B-206ENST00000536398 TDO2P48775 406 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 USP14P54578 494 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 ZNF333Q96JL9 665 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBE3B-206ENST00000536398 RBPJLQ9UBG7 517 aa17.08■□□□□ 0.32
UBE3B-206ENST00000536398 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 TNPO2O14787 897 aaKnown RBP17.07■□□□□ 0.32
UBE3B-206ENST00000536398 RASA1P20936 1047 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 Q3C1V9 767 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 VPS53Q5VIR6 699 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 RAET1EQ8TD07 263 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 CCDC17Q96LX7 622 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 TAOK2Q9UL54 1235 aa17.07■□□□□ 0.32
UBE3B-206ENST00000536398 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 PRDM1O75626 825 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 PDE4AP27815 886 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 FLT3LGP49771 235 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 PRMT2P55345 433 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 MLLT1Q03111 559 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-206ENST00000536398 ICA1Q05084 483 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 RPAP3Q9H6T3 665 aaPredicted RBP17.06■□□□□ 0.32
UBE3B-206ENST00000536398 MORF4L1Q9UBU8 362 aa17.06■□□□□ 0.32
UBE3B-206ENST00000536398 CNMDO75829 334 aa17.05■□□□□ 0.32
UBE3B-206ENST00000536398 EEF2P13639 858 aaKnown RBP17.05■□□□□ 0.32
UBE3B-206ENST00000536398 ATP2B2Q01814 1243 aa17.05■□□□□ 0.32
UBE3B-206ENST00000536398 PAGR1Q9BTK6 254 aa17.05■□□□□ 0.32
UBE3B-206ENST00000536398 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
UBE3B-206ENST00000536398 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
UBE3B-206ENST00000536398 ROBO3Q96MS0 1386 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-206ENST00000536398 MTFR1Q15390 333 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 NBPF11Q86T75 865 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 SPICE1Q8N0Z3 855 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 GPRC5AQ8NFJ5 357 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 HELLSQ9NRZ9 838 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
UBE3B-206ENST00000536398 MKI67P46013 3256 aaKnown RBP17.03■□□□□ 0.32
UBE3B-206ENST00000536398 ELNP15502 786 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
UBE3B-206ENST00000536398 GRK4P32298 578 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 ERVK-9P63128 1117 aa17.03■□□□□ 0.32
UBE3B-206ENST00000536398 ERVK-24P63145 666 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms