RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 FMNL1O95466 1100 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-204ENST00000535406 CYP2D6P10635 497 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 OSBPP22059 807 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 PRMT2P55345 433 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 FCGRTP55899 365 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 MLLT1Q03111 559 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-204ENST00000535406 SLC9C1Q4G0N8 1177 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 FSD1Q9BTV5 496 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
CDCA3-204ENST00000535406 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 BRCA2P51587 3418 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 RBBP6Q7Z6E9 1792 aaKnown RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 MPHOSPH10O00566 681 aaKnown RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 RNF113AO15541 343 aaKnown RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 HOXD10P28358 340 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 CTGFP29279 349 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 IRX3P78415 501 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 OSBP2Q969R2 916 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 RWDD1Q9H446 243 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 ARPP21Q9UBL0 812 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
CDCA3-204ENST00000535406 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
CDCA3-204ENST00000535406 CYP2D7A0A087X1C5 515 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L12C9JPN9 530 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L21D6R901 530 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 GPAA1O43292 621 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 USP14P54578 494 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 C12orf60Q5U649 245 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 NBPF11Q86T75 865 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 RAET1EQ8TD07 263 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 DYNLL2Q96FJ2 89 aa11.33□□□□□ -0.6
CDCA3-204ENST00000535406 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
CDCA3-204ENST00000535406 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
CDCA3-204ENST00000535406 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 M0R2C6 588 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 TNPO2O14787 897 aaKnown RBP11.32□□□□□ -0.6
CDCA3-204ENST00000535406 GNAT2P19087 354 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-204ENST00000535406 SEPT2Q15019 361 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 C16orf86Q6ZW13 317 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 ZNF333Q96JL9 665 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
CDCA3-204ENST00000535406 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 AKR1B1P15121 316 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 TDO2P48775 406 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 CDK8P49336 464 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 PDE1AP54750 535 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 HERVK_113P62684 666 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 PRKCZQ05513 592 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-204ENST00000535406 STAP2Q9UGK3 403 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 ROBO3Q96MS0 1386 aa11.31□□□□□ -0.6
CDCA3-204ENST00000535406 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 APPP05067 770 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 VCAM1P19320 739 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 ICA1Q05084 483 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 COA7Q96BR5 231 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
CDCA3-204ENST00000535406 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
CDCA3-204ENST00000535406 EPB41L4AQ9HCS5 686 aaPredicted RBP11.3□□□□□ -0.6
CDCA3-204ENST00000535406 MORF4L1Q9UBU8 362 aa11.3□□□□□ -0.6
CDCA3-204ENST00000535406 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 MYCP01106 439 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-204ENST00000535406 IGHDP01880 384 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 GRK4P32298 578 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
CDCA3-204ENST00000535406 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms