RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 TDHQ8IZJ6 230 aa19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 MIGA1Q8NAN2 632 aa19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 GTF3C2Q8WUA4 911 aaPredicted RBP19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 PORCNQ9H237 461 aa19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 DBNLQ9UJU6 430 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 OGDHLQ9ULD0 1010 aa19.17■□□□□ 0.66
CHMP4A-207ENST00000533523 RLBP1P12271 317 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 RGS2P41220 211 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 USP5P45974 858 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 MAP3K21Q5TCX8 1036 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 USP17L2Q6R6M4 530 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 GPR142Q7Z601 462 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 TRMT44Q8IYL2 757 aaKnown RBP19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 ZNF512BQ96KM6 892 aaPredicted RBP19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 APBA2Q99767 749 aa19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 CCDC8Q9H0W5 538 aaPredicted RBP19.16■□□□□ 0.66
CHMP4A-207ENST00000533523 XRCC5P13010 732 aaKnown RBP19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 ATP8B2P98198 1209 aa19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 CCL14Q16627 93 aa19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 PLEKHH3Q7Z736 793 aa19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 EMILIN3Q9NT22 766 aa19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 RBPJLQ9UBG7 517 aa19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 CHD9Q3L8U1 2897 aa19.15■□□□□ 0.66
CHMP4A-207ENST00000533523 CACNB2Q08289 660 aaPredicted RBP19.14■□□□□ 0.65
CHMP4A-207ENST00000533523 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
CHMP4A-207ENST00000533523 NDUFB9Q9Y6M9 179 aa19.14■□□□□ 0.65
CHMP4A-207ENST00000533523 POTEB2H3BUK9 544 aa19.13■□□□□ 0.65
CHMP4A-207ENST00000533523 COL6A1P12109 1028 aa19.13■□□□□ 0.65
CHMP4A-207ENST00000533523 CCND3P30281 292 aaPredicted RBP19.13■□□□□ 0.65
CHMP4A-207ENST00000533523 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
CHMP4A-207ENST00000533523 Q3C1V9 767 aa19.13■□□□□ 0.65
CHMP4A-207ENST00000533523 WDR78Q5VTH9 848 aa19.13■□□□□ 0.65
CHMP4A-207ENST00000533523 BAZ2AQ9UIF9 1905 aaKnown RBP19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 IGSF3O75054 1194 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 LRRC26Q2I0M4 334 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 MORN1Q5T089 497 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 POTEEQ6S8J3 1075 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 PANK1Q8TE04 598 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 USP6NLQ92738 828 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 SERPINB13Q9UIV8 391 aa19.12■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L15C9J2P7 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L13C9JLJ4 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L11C9JVI0 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L18D6R9N7 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L22D6RA61 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L17D6RBQ6 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L19D6RCP7 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L20D6RJB6 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 CCNA1P78396 465 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 USP17L24Q0WX57 530 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 EAF2Q96CJ1 260 aaPredicted RBP19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 NOP58Q9Y2X3 529 aaKnown RBP19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 RABGAP1Q9Y3P9 1069 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 MYH7P12883 1935 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 ZNF236Q9UL36 1845 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
CHMP4A-207ENST00000533523 CNMDO75829 334 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 NEFLP07196 543 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 VCAM1P19320 739 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 USP14P54578 494 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 MAP3K12Q12852 859 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 MAP2K5Q13163 448 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 ABCB5Q2M3G0 1257 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 UBE2OQ9C0C9 1292 aaKnown RBP19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 EHD4Q9H223 541 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 DDX19BQ9UMR2 479 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 RLFQ13129 1914 aa19.1■□□□□ 0.65
CHMP4A-207ENST00000533523 GLRX3O76003 335 aaKnown RBP19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 CERKLQ49MI3 558 aaPredicted RBP19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 TATDN1Q6P1N9 297 aa19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 TTC6Q86TZ1 520 aa19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 AACSQ86V21 672 aa19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 FAM161BQ96MY7 647 aa19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 PARP14Q460N5 1801 aa19.09■□□□□ 0.65
CHMP4A-207ENST00000533523 XIRP2A4UGR9 3374 aa19.08■□□□□ 0.65
CHMP4A-207ENST00000533523 IRX6P78412 446 aaPredicted RBP19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 MFSD14CQ5VZR4 134 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 LHX8Q68G74 356 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 ACER1Q8TDN7 264 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 KIAA1683Q9H0B3 1180 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 CABP5Q9NP86 173 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.64
CHMP4A-207ENST00000533523 COL11A1P12107 1806 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-207ENST00000533523 CEP85Q6P2H3 762 aa19.07■□□□□ 0.64
CHMP4A-207ENST00000533523 CATSPERGQ6ZRH7 1159 aa19.07■□□□□ 0.64
CHMP4A-207ENST00000533523 RPAP3Q9H6T3 665 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-207ENST00000533523 FLRT1Q9NZU1 646 aa19.07■□□□□ 0.64
CHMP4A-207ENST00000533523 CHD7Q9P2D1 2997 aa19.07■□□□□ 0.64
CHMP4A-207ENST00000533523 SLC15A5A6NIM6 579 aa19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 SPDYE16A6NNV3 312 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms