RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 NELFCDQ8IXH7 590 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 CSGALNACT2Q8N6G5 542 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 PNMA1Q8ND90 353 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 FAM207AQ9NSI2 230 aaPredicted RBP13.95□□□□□ -0.18
SCN3B-206ENST00000530277 PXDNQ92626 1479 aa13.95□□□□□ -0.18
SCN3B-206ENST00000530277 TERF1P54274 439 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 CCDC42Q96M95 316 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
SCN3B-206ENST00000530277 CALML3P27482 149 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 MLKLQ8NB16 471 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 RAB34Q9BZG1 259 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 TECP42680 631 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 GTF2IP78347 998 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 RABL6Q3YEC7 729 aaPredicted RBP13.94□□□□□ -0.18
SCN3B-206ENST00000530277 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 NELFBQ8WX92 580 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 DPF2Q92785 391 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 VPS18Q9P253 973 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 SAMM50Q9Y512 469 aa13.94□□□□□ -0.18
SCN3B-206ENST00000530277 TAX1BP1Q86VP1 789 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 FMR1NBQ8N0W7 255 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 PPP1R13BQ96KQ4 1090 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 ZBTB21Q9ULJ3 1066 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 MYO5BQ9ULV0 1848 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 ENC1O14682 589 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 ETF1P62495 437 aaKnown RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 MB21D2Q8IYB1 491 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 RRP36Q96EU6 259 aaKnown RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 PARP1P09874 1014 aaKnown RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 MRPS25P82663 173 aaKnown RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 MAEAQ7L5Y9 396 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-206ENST00000530277 TSG101Q99816 390 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 C6orf50Q9HD87 102 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 NLRC4Q9NPP4 1024 aa13.93□□□□□ -0.18
SCN3B-206ENST00000530277 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 SSR1P43307 286 aaKnown RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 GRIN1Q05586 938 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 PAK1Q13153 545 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 SMAP1Q8IYB5 467 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 SPAG5Q96R06 1193 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 PPP2R2CQ9Y2T4 447 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 ARHGAP6O43182 974 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 CHMP2AO43633 222 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 CASP14P31944 242 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 ANTXR2P58335 489 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 MFSD14BQ5SR56 506 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 RBM26Q5T8P6 1007 aaKnown RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 TAF4BQ92750 862 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 GOLGA1Q92805 767 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 RMND1Q9NWS8 449 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 MED23Q9ULK4 1368 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 TRAF5O00463 557 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 ZMYND10O75800 440 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 CHMP4BP1P59074 171 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 AMPD3Q01432 767 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 EXOSC10Q01780 885 aaKnown RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 SYCP1Q15431 976 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 USH1GQ495M9 461 aa13.92□□□□□ -0.18
SCN3B-206ENST00000530277 NOC4LQ9BVI4 516 aaKnown RBP13.92□□□□□ -0.18
SCN3B-206ENST00000530277 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 PAFAH1B1P43034 410 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 SP4Q02446 784 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 IRX2Q9BZI1 471 aaPredicted RBP13.91□□□□□ -0.18
SCN3B-206ENST00000530277 SOWAHDA6NJG2 315 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 BMP15O95972 392 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 KRT79Q5XKE5 535 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 FEZ1Q99689 392 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 CCDC113Q9H0I3 377 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 OGFRQ9NZT2 677 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 MAN1B1Q9UKM7 699 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 ST5P78524 1137 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 SHC4Q6S5L8 630 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
SCN3B-206ENST00000530277 MMP1P03956 469 aa13.9□□□□□ -0.18
SCN3B-206ENST00000530277 GNAQP50148 359 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms