RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 NEUROD6Q96NK8 337 aa10.52□□□□□ -0.73
TGFBR3-208ENST00000529608 P2RX7Q99572 595 aaKnown RBP10.52□□□□□ -0.73
TGFBR3-208ENST00000529608 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
TGFBR3-208ENST00000529608 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
TGFBR3-208ENST00000529608 USP17L5A8MUK1 530 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 ARID4AP29374 1257 aaPredicted RBP10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 MAGEA10P43363 369 aaPredicted RBP10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 MTX1Q13505 466 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 MTMR2Q13614 643 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 CCL14Q16627 93 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 NBPF3Q9H094 633 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 PORCNQ9H237 461 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 TSHZ2Q9NRE2 1034 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 RBPJLQ9UBG7 517 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 PCDHGA4Q9Y5G9 962 aa10.51□□□□□ -0.73
TGFBR3-208ENST00000529608 MYH1P12882 1939 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 PNMA6EA0A0J9YXQ4 647 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 COL6A1P12109 1028 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 TEX11Q8IYF3 940 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 PTCD2Q8WV60 388 aaKnown RBP10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 USP6NLQ92738 828 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 WDR18Q9BV38 432 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 API5Q9BZZ5 524 aaKnown RBP10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 C11orf49Q9H6J7 331 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 SNRKQ9NRH2 765 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 AATFQ9NY61 560 aaKnown RBP eCLIP10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 RAI14Q9P0K7 980 aa10.5□□□□□ -0.73
TGFBR3-208ENST00000529608 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 GDF11O95390 407 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 CAPN2P17655 700 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 HOXA7P31268 230 aaPredicted RBP10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 RARSP54136 660 aaKnown RBP10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 BACE1P56817 501 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 HERVK_113P62684 666 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 CACNB2Q08289 660 aaPredicted RBP10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 MAPKAPK5Q8IW41 473 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 HERC5Q9UII4 1024 aaKnown RBP10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 AKAP2Q9Y2D5 859 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 LTBP2Q14767 1821 aa10.49□□□□□ -0.73
TGFBR3-208ENST00000529608 CNMDO75829 334 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 CYP2E1P05181 493 aaPredicted RBP10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 LDHCP07864 332 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 DYNLL1P63167 89 aaKnown RBP10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 GSTO1P78417 241 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 PABPC4Q13310 644 aaKnown RBP eCLIP10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 LRRC26Q2I0M4 334 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 LRIT3Q3SXY7 679 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 TGFBRAP1Q8WUH2 860 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 HS3ST6Q96QI5 342 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 TBC1D2Q9BYX2 928 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 AS3MTQ9HBK9 375 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 MTMR10Q9NXD2 777 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 FLRT1Q9NZU1 646 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 PI4KBQ9UBF8 816 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 PALD1Q9ULE6 856 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 FLT1P17948 1338 aa10.48□□□□□ -0.73
TGFBR3-208ENST00000529608 MAP4K4O95819 1239 aaPredicted RBP10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 PPP4CP60510 307 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 ERVK-24P63145 666 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 IRX3P78415 501 aaPredicted RBP10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 MORN1Q5T089 497 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 GPR142Q7Z601 462 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 NUDT12Q9BQG2 462 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 DBNDD2Q9BQY9 259 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 PAGR1Q9BTK6 254 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 LRP2BPQ9P2M1 347 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 ZBTB21Q9ULJ3 1066 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 NDUFB9Q9Y6M9 179 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 UNC80Q8N2C7 3258 aa10.47□□□□□ -0.73
TGFBR3-208ENST00000529608 USP17L10C9JJH3 530 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 ASNSP08243 561 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 GNAI3P08754 354 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 NUDT7P0C024 238 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 TRIM27P14373 513 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 NAA16Q6N069 864 aaPredicted RBP10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 GPRC5AQ8NFJ5 357 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 CCDC136Q96JN2 1154 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 PIH1D3Q9NQM4 214 aaKnown RBP10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 TMOD4Q9NZQ9 345 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.73
TGFBR3-208ENST00000529608 RLFQ13129 1914 aa10.46□□□□□ -0.74
TGFBR3-208ENST00000529608 C19orf81C9J6K1 198 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms