RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CYP2D6P10635 497 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 TOP1P11387 765 aaKnown RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 KIF5BP33176 963 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 GNAQP50148 359 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 ZNF157P51786 506 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 SREBF2Q12772 1141 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 NOGQ13253 232 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 SNAPC2Q13487 334 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 VGLL4Q14135 290 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 WTAPQ15007 396 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 RGMBQ6NW40 437 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 CATIPQ7Z7H3 387 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 SAPCD2Q86UD0 394 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 TBC1D10CQ8IV04 446 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 MKL1Q969V6 931 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 DYNLL2Q96FJ2 89 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 ZSCAN10Q96SZ4 725 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 MAP3K14Q99558 947 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 IL25Q9H293 177 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 ALDH8A1Q9H2A2 487 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 ZSWIM6Q9HCJ5 1215 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 ZCCHC17Q9NP64 241 aaKnown RBP9.3□□□□□ -0.92
SSBP3-211ENST00000528787 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 SNX14Q9Y5W7 946 aa9.3□□□□□ -0.92
SSBP3-211ENST00000528787 CYP2D7A0A087X1C5 515 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 PRC1O43663 620 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 ALDH1A1P00352 501 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 FDX1P10109 184 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 CETPP11597 493 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 PTPRAP18433 802 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 PRKG1Q13976 671 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 SLC4A8Q2Y0W8 1093 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 DEFB115Q30KQ5 88 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 TMEM67Q5HYA8 995 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 GPATCH4Q5T3I0 446 aaKnown RBP9.29□□□□□ -0.92
SSBP3-211ENST00000528787 PRAMEF18Q5VWM3 479 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 CPLX2Q6PUV4 134 aaKnown RBP9.29□□□□□ -0.92
SSBP3-211ENST00000528787 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 NFXL1Q6ZNB6 911 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-211ENST00000528787 GMCL1P1Q8NEA9 526 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 ANKS1AQ92625 1134 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 MTMR4Q9NYA4 1195 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 ZSWIM5Q9P217 1185 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 SLC12A7Q9Y666 1083 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 GREB1LQ9C091 1923 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-211ENST00000528787 TNKSO95271 1327 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 NEDD4P46934 1319 aa9.29□□□□□ -0.92
SSBP3-211ENST00000528787 OTOFQ9HC10 1997 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 PRDM1O75626 825 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 DDAH1O94760 285 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 AKR1B1P15121 316 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 RPS6KB1P23443 525 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 CST9Q5W186 159 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 MB21D2Q8IYB1 491 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 CTCFLQ8NI51 663 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 DCAF4Q8WV16 495 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 ZKSCAN4Q969J2 545 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 ZSCAN31Q96LW9 406 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 LZTS2Q9BRK4 669 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 DNAJC18Q9H819 358 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 PDRG1Q9NUG6 133 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 RBM28Q9NW13 759 aaKnown RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
SSBP3-211ENST00000528787 SLC45A1Q9Y2W3 748 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 TMX2Q9Y320 296 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 ZHX2Q9Y6X8 837 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 SSC5DA1L4H1 1573 aa9.28□□□□□ -0.92
SSBP3-211ENST00000528787 IGKV6D-41A0A0C4DH26 115 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 RASSF10A6NK89 507 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 UBE2Q2LH0YL09 131 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 WDR46O15213 610 aaKnown RBP9.27□□□□□ -0.93
SSBP3-211ENST00000528787 CDKL5O76039 1030 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 GDF11O95390 407 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
SSBP3-211ENST00000528787 INPP5BP32019 993 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 MAP2K2P36507 400 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 NOVP48745 357 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 NEK4P51957 841 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 BACE1P56817 501 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 ATP2B2Q01814 1243 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 SEPT2Q15019 361 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 ASPRV1Q53RT3 343 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 FAM47AQ5JRC9 791 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-211ENST00000528787 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 STK11IPQ8N1F8 1099 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 SLC44A5Q8NCS7 719 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 CHURC1Q8WUH1 139 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 OPTNQ96CV9 577 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 OTUD5Q96G74 571 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 CEP95Q96GE4 821 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 GMCL1Q96IK5 515 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 WNK4Q96J92 1243 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 ELP3Q9H9T3 547 aa9.27□□□□□ -0.93
SSBP3-211ENST00000528787 SH2B1Q9NRF2 756 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms