RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 EXOSC10Q01780 885 aaKnown RBP19.47■□□□□ 0.71
CAPN1-205ENST00000526954 PPATQ06203 517 aa19.47■□□□□ 0.71
CAPN1-205ENST00000526954 COL9A3Q14050 684 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-205ENST00000526954 RAB3GAP1Q15042 981 aa19.47■□□□□ 0.71
CAPN1-205ENST00000526954 SIAH1Q8IUQ4 282 aa19.47■□□□□ 0.71
CAPN1-205ENST00000526954 WDR18Q9BV38 432 aa19.47■□□□□ 0.71
CAPN1-205ENST00000526954 NYAP2Q9P242 653 aa19.47■□□□□ 0.71
CAPN1-205ENST00000526954 NMT2O60551 498 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 CASTP20810 708 aaKnown RBP19.46■□□□□ 0.71
CAPN1-205ENST00000526954 RGMBQ6NW40 437 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 BLOC1S2Q6QNY1 142 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 ANKS1AQ92625 1134 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 CEP95Q96GE4 821 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 TTC14Q96N46 770 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 ZSCAN10Q96SZ4 725 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-205ENST00000526954 KIF2CQ99661 725 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 AS3MTQ9HBK9 375 aa19.46■□□□□ 0.71
CAPN1-205ENST00000526954 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-205ENST00000526954 ABT1Q9ULW3 272 aaKnown RBP19.46■□□□□ 0.71
CAPN1-205ENST00000526954 PRC1O43663 620 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 RPS6KB1P23443 525 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 C1QTNF8P60827 252 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 ICA1Q05084 483 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 PPIL2Q13356 520 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 RUFY3Q7L099 469 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 DGKHQ86XP1 1220 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 MKL1Q969V6 931 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 OPTNQ96CV9 577 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 TMEM87BQ96K49 555 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 UBAC1Q9BSL1 405 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 AFG3L2Q9Y4W6 797 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 CYP46A1Q9Y6A2 500 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 ZHX2Q9Y6X8 837 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 PTPRFP10586 1907 aa19.45■□□□□ 0.7
CAPN1-205ENST00000526954 RASSF10A6NK89 507 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 TTLL1O95922 423 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 EEF2P13639 858 aaKnown RBP19.44■□□□□ 0.7
CAPN1-205ENST00000526954 ZNF157P51786 506 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-205ENST00000526954 SART3Q15020 963 aaKnown RBP19.44■□□□□ 0.7
CAPN1-205ENST00000526954 SEC23AQ15436 765 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 CLEC10AQ8IUN9 316 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 FBXL16Q8N461 479 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 ENAHQ8N8S7 591 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-205ENST00000526954 ZNF280CQ8ND82 737 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 IGDCC4Q8TDY8 1250 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 WNK4Q96J92 1243 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 ZKSCAN3Q9BRR0 538 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 SYNPO2Q9UMS6 1093 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 TNKSO95271 1327 aa19.44■□□□□ 0.7
CAPN1-205ENST00000526954 IFIT3O14879 490 aaKnown RBP19.43■□□□□ 0.7
CAPN1-205ENST00000526954 ZBTB48P10074 688 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-205ENST00000526954 GJA5P36382 358 aa19.43■□□□□ 0.7
CAPN1-205ENST00000526954 CCDC84Q86UT8 332 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-205ENST00000526954 RASAL3Q86YV0 1011 aa19.43■□□□□ 0.7
CAPN1-205ENST00000526954 CCDC102AQ96A19 550 aa19.43■□□□□ 0.7
CAPN1-205ENST00000526954 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
CAPN1-205ENST00000526954 ARHGEF10LQ9HCE6 1279 aa19.43■□□□□ 0.7
CAPN1-205ENST00000526954 KCNH4Q9UQ05 1017 aa19.43■□□□□ 0.7
CAPN1-205ENST00000526954 A0A1W2PRG0 241 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 ERICH2A1L162 156 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 CXCL11O14625 94 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 IRF6O14896 467 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 SLC10A3P09131 477 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 CPA1P15085 419 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 LIFRP42702 1097 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 SPP2Q13103 211 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 SPRYD7Q5W111 196 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 IL27Q8NEV9 243 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 ACER1Q8TDN7 264 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 KIAA1683Q9H0B3 1180 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 SH2D4AQ9H788 454 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 TMX2Q9Y320 296 aa19.42■□□□□ 0.7
CAPN1-205ENST00000526954 FAM155AB1AL88 458 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-205ENST00000526954 C19orf81C9J6K1 198 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 SH2B2O14492 632 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-205ENST00000526954 TOP1P11387 765 aaKnown RBP19.41■□□□□ 0.7
CAPN1-205ENST00000526954 ECE1P42892 770 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 DEFB115Q30KQ5 88 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 TMEM67Q5HYA8 995 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 TMTC2Q8N394 836 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 AGXT2Q9BYV1 514 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 UPF3BQ9BZI7 483 aaKnown RBP19.41■□□□□ 0.7
CAPN1-205ENST00000526954 ALDH8A1Q9H2A2 487 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-205ENST00000526954 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-205ENST00000526954 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
CAPN1-205ENST00000526954 USP17L10C9JJH3 530 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 HSPA6P17066 643 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 BACE1P56817 501 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 WTAPQ15007 396 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 SH3D19Q5HYK7 790 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 IFIT1BQ5T764 474 aaKnown RBP19.4■□□□□ 0.7
CAPN1-205ENST00000526954 TMEM47Q9BQJ4 181 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 LY9Q9HBG7 655 aa19.4■□□□□ 0.7
CAPN1-205ENST00000526954 A0A0G2JLL6 359 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-205ENST00000526954 TRIM75PA6NK02 468 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 USP14P54578 494 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms