RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
CLDND1-231ENST00000515620 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
CLDND1-231ENST00000515620 RLFQ13129 1914 aa12.97□□□□□ -0.33
CLDND1-231ENST00000515620 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
CLDND1-231ENST00000515620 HOXC6P09630 235 aa12.96□□□□□ -0.33
CLDND1-231ENST00000515620 GRIN2CQ14957 1233 aa12.96□□□□□ -0.33
CLDND1-231ENST00000515620 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
CLDND1-231ENST00000515620 MAPKAPK5Q8IW41 473 aa12.96□□□□□ -0.33
CLDND1-231ENST00000515620 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
CLDND1-231ENST00000515620 NOL10Q9BSC4 688 aaKnown RBP12.96□□□□□ -0.33
CLDND1-231ENST00000515620 DHX36Q9H2U1 1008 aaKnown RBP12.96□□□□□ -0.33
CLDND1-231ENST00000515620 FLT1P17948 1338 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 DNAJB2P25686 324 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 GRB14Q14449 540 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 SNX17Q15036 470 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 FEZ1Q99689 392 aa12.95□□□□□ -0.34
CLDND1-231ENST00000515620 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L15C9J2P7 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L13C9JLJ4 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L11C9JVI0 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L18D6R9N7 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L22D6RA61 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L17D6RBQ6 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L19D6RCP7 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L20D6RJB6 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 ITGB8P26012 769 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 EPHB4P54760 987 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 USP17L24Q0WX57 530 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 TFCP2Q12800 502 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 TGFBRAP1Q8WUH2 860 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 SSH1Q8WYL5 1049 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 COPRSQ9NQ92 184 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 BTBD7Q9P203 1132 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 AKAP2Q9Y2D5 859 aa12.94□□□□□ -0.34
CLDND1-231ENST00000515620 GH2P01242 217 aa12.93□□□□□ -0.34
CLDND1-231ENST00000515620 TLE2Q04725 743 aa12.93□□□□□ -0.34
CLDND1-231ENST00000515620 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
CLDND1-231ENST00000515620 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
CLDND1-231ENST00000515620 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
CLDND1-231ENST00000515620 FOXP4Q8IVH2 680 aaPredicted RBP12.93□□□□□ -0.34
CLDND1-231ENST00000515620 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
CLDND1-231ENST00000515620 C12orf42Q96LP6 360 aa12.93□□□□□ -0.34
CLDND1-231ENST00000515620 SAP30BPQ9UHR5 308 aaKnown RBP12.93□□□□□ -0.34
CLDND1-231ENST00000515620 SEPT4O43236 478 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 BAG3O95817 575 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 IGHA2P01877 340 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 PLCG2P16885 1265 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 VCAM1P19320 739 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 ADORA2AP29274 412 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 LRRC41Q15345 812 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 FAM47AQ5JRC9 791 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 CATSPERGQ6ZRH7 1159 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 ADAMTS19Q8TE59 1207 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 ZNF576Q9H609 170 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-231ENST00000515620 ZNF236Q9UL36 1845 aa12.92□□□□□ -0.34
CLDND1-231ENST00000515620 SPDYE16A6NNV3 312 aaPredicted RBP12.91□□□□□ -0.34
CLDND1-231ENST00000515620 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 CLTBP09497 229 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 RAG1P15918 1043 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
CLDND1-231ENST00000515620 MCAMP43121 646 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 FPGSQ05932 587 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 C1orf53Q5VUE5 145 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
CLDND1-231ENST00000515620 ATXN2LQ8WWM7 1075 aaKnown RBP12.91□□□□□ -0.34
CLDND1-231ENST00000515620 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
CLDND1-231ENST00000515620 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-231ENST00000515620 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-231ENST00000515620 PQBP1O60828 265 aaKnown RBP12.9□□□□□ -0.34
CLDND1-231ENST00000515620 USP14P54578 494 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 RAB3GAP1Q15042 981 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 PRAMEF19Q5SWL8 479 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 ASB2Q96Q27 587 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-231ENST00000515620 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-231ENST00000515620 KIAA1683Q9H0B3 1180 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
CLDND1-231ENST00000515620 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 CDK5RAP2Q96SN8 1893 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
CLDND1-231ENST00000515620 KIAA0355O15063 1070 aa12.89□□□□□ -0.35
CLDND1-231ENST00000515620 ATF7IPQ6VMQ6 1270 aa12.89□□□□□ -0.35
CLDND1-231ENST00000515620 ACER1Q8TDN7 264 aa12.89□□□□□ -0.35
CLDND1-231ENST00000515620 MEIS3Q99687 375 aa12.89□□□□□ -0.35
CLDND1-231ENST00000515620 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms