RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 CEP89Q96ST8 783 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 DHRS4Q9BTZ2 278 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 NCOA5Q9HCD5 579 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 G3BP2Q9UN86 482 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 TRBV23-1A0A0A0MS06 115 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 PLD2O14939 933 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 CLEC3AO75596 197 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 UBOX5O94941 541 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 SOX5P35711 763 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 DUOXA2Q1HG44 320 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 HSP90AB2PQ58FF8 381 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 C1orf229Q6ZS94 237 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 NPAS3Q8IXF0 933 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 KCT2Q8NC54 265 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 UBASH3BQ8TF42 649 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 KISS1RQ969F8 398 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 ACDQ96AP0 544 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 HAUS7Q99871 368 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 DPH2Q9BQC3 489 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 AARSD1Q9BTE6 412 aaKnown RBP6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 ATXN3LQ9H3M9 355 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 CAAP1Q9H8G2 361 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 FBRSQ9HAH7 460 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 ARHGEF4Q9NR80 690 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 KCNK4Q9NYG8 393 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 CHPF2Q9P2E5 772 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 ATP8A1Q9Y2Q0 1164 aa6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 MRPS23Q9Y3D9 190 aaKnown RBP6.89□□□□□ -1.31
CALCOCO2-222ENST00000514006 H3BM21 787 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 PDE8AO60658 829 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 RAPGEF3O95398 923 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 EPHX1P07099 455 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 NTF4P34130 210 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 FNDC3BQ53EP0 1204 aaKnown RBP6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 FAM209AQ5JX71 171 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 JAMLQ86YT9 394 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 LRRN4CLQ8ND94 238 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 BTBD6Q96KE9 485 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 RUSC1Q9BVN2 902 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 DISC1Q9NRI5 854 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 SUSD2Q9UGT4 822 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 AP4E1Q9UPM8 1137 aa6.88□□□□□ -1.31
CALCOCO2-222ENST00000514006 A0A087X0B3 334 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 C9IYK1 514 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 KCNQ2O43526 872 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 DEAF1O75398 565 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 VSIG8P0DPA2 414 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 NID1P14543 1247 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 AMPD1P23109 780 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 PPP2R2AP63151 447 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 NKG7Q16617 165 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 ODR4Q5SWX8 454 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 AXDND1Q5T1B0 1012 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 SCUBE1Q8IWY4 988 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 CCDC144CPQ8IYA2 1237 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 DTWD1Q8N5C7 304 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 BAHD1Q8TBE0 780 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 CYB5D2Q8WUJ1 264 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 JDP2Q8WYK2 163 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 TMPRSS13Q9BYE2 586 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 MCM8Q9UJA3 840 aa6.87□□□□□ -1.31
CALCOCO2-222ENST00000514006 SPDYE3A6NKU9 549 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 OIP5O43482 229 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 ADAMTS2O95450 1211 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 ITGAVP06756 1048 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 CDKN1CP49918 316 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 EVA1CP58658 441 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 NFKB2Q00653 900 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 YOD1Q5VVQ6 348 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 PRAMEF13Q5VWM6 474 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 NUTM2GQ5VZR2 741 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 ILDR2Q71H61 639 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 ADAT2Q7Z6V5 191 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 ZNF227Q86WZ6 799 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 FGD4Q96M96 766 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 IER2Q9BTL4 223 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 MRPL4Q9BYD3 311 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 KLHL25Q9H0H3 589 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 GBP3Q9H0R5 595 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 CYP4F12Q9HCS2 524 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 SUGT1Q9Y2Z0 365 aa6.86□□□□□ -1.31
CALCOCO2-222ENST00000514006 MEGF11A6BM72 1044 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 CBFA2T2O43439 604 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 CST3P01034 146 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 NEFMP07197 916 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 ADH5P11766 374 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 CAP2P40123 477 aa6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 SUMO1P63165 101 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-222ENST00000514006 SLBPQ14493 270 aaKnown RBP eCLIP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms