RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ATP8A2Q9NTI2 1148 aa7.81□□□□□ -1.16
KDM3B-208ENST00000512928 GINM1Q9NU53 330 aa7.81□□□□□ -1.16
KDM3B-208ENST00000512928 BIN2Q9UBW5 565 aaPredicted RBP7.81□□□□□ -1.16
KDM3B-208ENST00000512928 LOC285556D6RIA3 1793 aa7.81□□□□□ -1.16
KDM3B-208ENST00000512928 CENPFP49454 3210 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 PTPRFP10586 1907 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 MYH7P12883 1935 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 MINDY4BA8MYZ0 360 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 USP17L21D6R901 530 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 M0R2C6 588 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 GPAA1O43292 621 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 RAD21O60216 631 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 ABCB7O75027 752 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 ZFYP08048 801 aaPredicted RBP7.8□□□□□ -1.16
KDM3B-208ENST00000512928 BCRP11274 1271 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 CTGFP29279 349 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 PRKCZQ05513 592 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 HDAC1Q13547 482 aaPredicted RBP7.8□□□□□ -1.16
KDM3B-208ENST00000512928 SEPT2Q15019 361 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 SH3D19Q5HYK7 790 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 USP17L2Q6R6M4 530 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 CCAR1Q8IX12 1150 aaKnown RBP7.8□□□□□ -1.16
KDM3B-208ENST00000512928 PI4K2BQ8TCG2 481 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 ACER1Q8TDN7 264 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 APPBP2Q92624 585 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 PAGR1Q9BTK6 254 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 TMEM106CQ9BVX2 250 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 LNPKQ9C0E8 428 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 ARPP21Q9UBL0 812 aaPredicted RBP7.8□□□□□ -1.16
KDM3B-208ENST00000512928 SRRDQ9UH36 339 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 SWAP70Q9UH65 585 aa7.8□□□□□ -1.16
KDM3B-208ENST00000512928 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 SMIM22K7EJ46 135 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 GCLCP48506 637 aaPredicted RBP7.79□□□□□ -1.16
KDM3B-208ENST00000512928 FXR1P51114 621 aaKnown RBP eCLIP7.79□□□□□ -1.16
KDM3B-208ENST00000512928 USP14P54578 494 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 PRMT2P55345 433 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 C12orf60Q5U649 245 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 TMEM179Q6ZVK1 233 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 CLEC10AQ8IUN9 316 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 OSBP2Q969R2 916 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 COA7Q96BR5 231 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 STRBPQ96SI9 672 aaKnown RBP7.79□□□□□ -1.16
KDM3B-208ENST00000512928 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
KDM3B-208ENST00000512928 TANGO6Q9C0B7 1094 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
KDM3B-208ENST00000512928 BAZ2AQ9UIF9 1905 aaKnown RBP7.78□□□□□ -1.16
KDM3B-208ENST00000512928 PEX10O60683 326 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 CENPBP07199 599 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-208ENST00000512928 AKR1B1P15121 316 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 GNAT2P19087 354 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 VCAM1P19320 739 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 GRK4P32298 578 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 CDK8P49336 464 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 FLT3LGP49771 235 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 PDE1AP54750 535 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 HERVK_113P62684 666 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 ICA1Q05084 483 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 GABPAQ06546 454 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 FAM110CQ1W6H9 321 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 WDR78Q5VTH9 848 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 CTR9Q6PD62 1173 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 SPICE1Q8N0Z3 855 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 GPRC5AQ8NFJ5 357 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 RILPL2Q969X0 211 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 ARMC5Q96C12 935 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 ZNF333Q96JL9 665 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 SEC62Q99442 399 aaKnown RBP7.78□□□□□ -1.16
KDM3B-208ENST00000512928 NACAP1Q9BZK3 213 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 KIAA1683Q9H0B3 1180 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 RPAP3Q9H6T3 665 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-208ENST00000512928 SH2D4AQ9H788 454 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 ARHGEF10LQ9HCE6 1279 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 GABRQQ9UN88 632 aa7.78□□□□□ -1.16
KDM3B-208ENST00000512928 COLQQ9Y215 455 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-208ENST00000512928 GSG1L2A8MUP6 293 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 ADCY3O60266 1144 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 IGHDP01880 384 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 ELNP15502 786 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 HOXA7P31268 230 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-208ENST00000512928 GUCY1A2P33402 732 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 UBXN2AP68543 259 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 CCDC129Q6ZRS4 1044 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 C16orf86Q6ZW13 317 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 CHD1LQ86WJ1 897 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 EVI5LQ96CN4 794 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 NAPBQ9H115 298 aa7.77□□□□□ -1.17
KDM3B-208ENST00000512928 EPB41L4AQ9HCS5 686 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-208ENST00000512928 MYH8P13535 1937 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms