RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 LRRC26Q2I0M4 334 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 SHROOM1Q2M3G4 852 aaPredicted RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 MAPKAPK5Q8IW41 473 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 CRACR2BQ8N4Y2 399 aaPredicted RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 GPRC5AQ8NFJ5 357 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 SH3RF3Q8TEJ3 882 aaPredicted RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 ZNF384Q8TF68 577 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 LBHD1Q9BQE6 289 aaPredicted RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 COL25A1Q9BXS0 654 aaPredicted RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 TXNRD2Q9NNW7 524 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 RYDENQ9NUL5 291 aaKnown RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 LRP2BPQ9P2M1 347 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 SAP30BPQ9UHR5 308 aaKnown RBP7.11□□□□□ -1.27
GYPB-208ENST00000507009 GJD2Q9UKL4 321 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 OGDHLQ9ULD0 1010 aa7.11□□□□□ -1.27
GYPB-208ENST00000507009 GPR75-ASB3A0A0A6YYF3 556 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 SRGAP3O43295 1099 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 CAPN2P17655 700 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 HERVK_113P62684 666 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 MAP3K10Q02779 954 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 LRIT3Q3SXY7 679 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.1□□□□□ -1.27
GYPB-208ENST00000507009 SPATA5Q8NB90 893 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 SOCS4Q8WXH5 440 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 MEIS3Q99687 375 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 SENP6Q9GZR1 1112 aaPredicted RBP7.1□□□□□ -1.27
GYPB-208ENST00000507009 SNRKQ9NRH2 765 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 AATFQ9NY61 560 aaKnown RBP eCLIP7.1□□□□□ -1.27
GYPB-208ENST00000507009 HMG20BQ9P0W2 317 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 MORF4L1Q9UBU8 362 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 NOB1Q9ULX3 412 aaKnown RBP7.1□□□□□ -1.27
GYPB-208ENST00000507009 AKAP2Q9Y2D5 859 aa7.1□□□□□ -1.27
GYPB-208ENST00000507009 FRMPD3Q5JV73 1810 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 A0A0C4DFX4 3053 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 USP17L10C9JJH3 530 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 E9PSI1 815 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 RGS2P41220 211 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 BACE1P56817 501 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 ERVK-24P63145 666 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 JAG1P78504 1218 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 Q3C1V9 767 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 SH3D19Q5HYK7 790 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 ADGRD1Q6QNK2 874 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 GPR142Q7Z601 462 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 PLEKHH3Q7Z736 793 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 TGFBRAP1Q8WUH2 860 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 NSUN4Q96CB9 384 aaKnown RBP7.09□□□□□ -1.27
GYPB-208ENST00000507009 CDCA7LQ96GN5 454 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 FEZ1Q99689 392 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 TBC1D2Q9BYX2 928 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 PORCNQ9H237 461 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 PRDM5Q9NQX1 630 aaPredicted RBP7.09□□□□□ -1.27
GYPB-208ENST00000507009 PI4KBQ9UBF8 816 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 PRKAG2Q9UGJ0 569 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 ATP11BQ9Y2G3 1177 aa7.09□□□□□ -1.27
GYPB-208ENST00000507009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
GYPB-208ENST00000507009 SIPA1L1O43166 1804 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 ZNF521Q96K83 1311 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 ASNSP08243 561 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 MAPK4P31152 587 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 PSEN2P49810 448 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 PPP4R3BQ5MIZ7 849 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 TTC39AQ5SRH9 613 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 MAP3K21Q5TCX8 1036 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 ZNF697Q5TEC3 545 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 MFSD14CQ5VZR4 134 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 ANO1Q5XXA6 986 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 NAA16Q6N069 864 aaPredicted RBP7.08□□□□□ -1.28
GYPB-208ENST00000507009 TRMT44Q8IYL2 757 aaKnown RBP7.08□□□□□ -1.28
GYPB-208ENST00000507009 APBA2Q99767 749 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 COPRSQ9NQ92 184 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 RBPJLQ9UBG7 517 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 HERC5Q9UII4 1024 aaKnown RBP7.08□□□□□ -1.28
GYPB-208ENST00000507009 PALD1Q9ULE6 856 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 HDAC5Q9UQL6 1122 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 LAMA3Q16787 3333 aa7.08□□□□□ -1.28
GYPB-208ENST00000507009 PDS5AQ29RF7 1337 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 CDK5RAP2Q96SN8 1893 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 MYO5AQ9Y4I1 1855 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 C19orf81C9J6K1 198 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 GLRX3O76003 335 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 BAG3O95817 575 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 GH2P01242 217 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 HLA-DOAP06340 250 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 COL6A1P12109 1028 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 XRCC5P13010 732 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 CYP2C19P33261 490 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 MCAMP43121 646 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 DYNLL1P63167 89 aaKnown RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 ATP2B2Q01814 1243 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 SLFN5Q08AF3 891 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 MAP2K5Q13163 448 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 G3BP1Q13283 466 aaKnown RBP eCLIP7.07□□□□□ -1.28
GYPB-208ENST00000507009 OS9Q13438 667 aaPredicted RBP7.07□□□□□ -1.28
GYPB-208ENST00000507009 RAB3GAP1Q15042 981 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 ALDH1L2Q3SY69 923 aa7.07□□□□□ -1.28
GYPB-208ENST00000507009 PPP1R15BQ5SWA1 713 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms