RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 ERVK-24P63145 666 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 TFF2Q03403 129 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 RALBP1Q15311 655 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 PUM3Q15397 648 aaKnown RBP8.62□□□□□ -1.03
RFC1-206ENST00000503784 TMEM31Q5JXX7 168 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 AKNAD1Q5T1N1 836 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 TRPV1Q8NER1 839 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 IDI2Q9BXS1 227 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 TMOD4Q9NZQ9 345 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 AK9Q5TCS8 1911 aa8.62□□□□□ -1.03
RFC1-206ENST00000503784 UTYO14607 1347 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 MYBBP1AQ9BQG0 1328 aaKnown RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 PTPRFP10586 1907 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 GRXCR1A8MXD5 290 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 SLC5A1P13866 664 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 BTDP43251 543 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 KCNQ1P51787 676 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 TLE2Q04725 743 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 FPGSQ05932 587 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 ADGRE1Q14246 886 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 RRP1BQ14684 758 aaKnown RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 Q3C1V9 767 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 SLC4A10Q6U841 1118 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 EDC3Q96F86 508 aaKnown RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 OSBPL5Q9H0X9 879 aaPredicted RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 RBPJLQ9UBG7 517 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 ARIH1Q9Y4X5 557 aaPredicted RBP8.61□□□□□ -1.03
RFC1-206ENST00000503784 LOC285556D6RIA3 1793 aa8.61□□□□□ -1.03
RFC1-206ENST00000503784 PHIPQ8WWQ0 1821 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 PQBP1O60828 265 aaKnown RBP8.6□□□□□ -1.03
RFC1-206ENST00000503784 CLTBP09497 229 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 RAG1P15918 1043 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 FGFR2P21802 821 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 CAP2P40123 477 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
RFC1-206ENST00000503784 SH3D19Q5HYK7 790 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 ARRDC4Q8NCT1 418 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 NPLOC4Q8TAT6 608 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 KAZALD1Q96I82 304 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 AS3MTQ9HBK9 375 aa8.6□□□□□ -1.03
RFC1-206ENST00000503784 GAKO14976 1311 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 KIF16BQ96L93 1317 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 BMP1P13497 986 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 CYBAP13498 195 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 SNX17Q15036 470 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 SHROOM1Q2M3G4 852 aaPredicted RBP8.59□□□□□ -1.03
RFC1-206ENST00000503784 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 CXXC1Q9P0U4 656 aaPredicted RBP8.59□□□□□ -1.03
RFC1-206ENST00000503784 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
RFC1-206ENST00000503784 GLRX3O76003 335 aaKnown RBP8.58□□□□□ -1.04
RFC1-206ENST00000503784 NBPF7P0C2Y1 421 aaPredicted RBP8.58□□□□□ -1.04
RFC1-206ENST00000503784 HOXA7P31268 230 aaPredicted RBP8.58□□□□□ -1.04
RFC1-206ENST00000503784 MRE11P49959 708 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 BACE1P56817 501 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 LRRC41Q15345 812 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 ZYXQ15942 572 aaKnown RBP8.58□□□□□ -1.04
RFC1-206ENST00000503784 FAM47AQ5JRC9 791 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
RFC1-206ENST00000503784 NKX2-4Q9H2Z4 354 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 TMEM39AQ9NV64 488 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 ABCF2Q9UG63 623 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 FRMPD3Q5JV73 1810 aa8.58□□□□□ -1.04
RFC1-206ENST00000503784 SLC15A5A6NIM6 579 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 TBC1D12O60347 775 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 PTPREP23469 700 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 PHKA1P46020 1223 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 CCNA1P78396 465 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 JAG1P78504 1218 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 PRAMEF19Q5SWL8 479 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 IFNLR1Q8IU57 520 aaPredicted RBP8.57□□□□□ -1.04
RFC1-206ENST00000503784 GTF3C2Q8WUA4 911 aaPredicted RBP8.57□□□□□ -1.04
RFC1-206ENST00000503784 LPIN2Q92539 896 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 C11orf16Q9NQ32 467 aa8.57□□□□□ -1.04
RFC1-206ENST00000503784 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
RFC1-206ENST00000503784 MROH7-TTC4A0A0A0MT08 1334 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 USP17L10C9JJH3 530 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 APBB1O00213 710 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 KIAA0355O15063 1070 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 SEPT4O43236 478 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 CNMDO75829 334 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 GDF11O95390 407 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 RHBDL3P58872 404 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 GRB14Q14449 540 aa8.56□□□□□ -1.04
RFC1-206ENST00000503784 ATP2B3Q16720 1220 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms