RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CCDC30Q5VVM6 783 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 XRRA1Q6P2D8 792 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 MMS22LQ6ZRQ5 1243 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 G2E3Q7L622 706 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 JAMLQ86YT9 394 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 ANKRD20A12PQ8NF67 263 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 RHPN1Q8TCX5 695 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 KIF1BPQ96EK5 621 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 PDZD7Q9H5P4 517 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 A1CFQ9NQ94 594 aaKnown RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 EURLQ9NYK6 297 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 LEMD3Q9Y2U8 911 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 LZTS3O60299 673 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 GLRX3O76003 335 aaKnown RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 TOB2Q14106 344 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 MORC1Q86VD1 984 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 CHD1LQ86WJ1 897 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 SP8Q8IXZ3 490 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 FATE1Q969F0 183 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 ZDHHC15Q96MV8 337 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 FAM210AQ96ND0 272 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 ESYT1Q9BSJ8 1104 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 TTC7AQ9ULT0 858 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 TBX3O15119 743 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 DDX58O95786 925 aaKnown RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 WEE2P0C1S8 567 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 SH3BGRP55822 239 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 PTPN14Q15678 1187 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 MCTP2Q6DN12 878 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 POTEDQ86YR6 584 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 ERC1Q8IUD2 1116 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 MAB21L3Q8N8X9 362 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 IGSF22Q8N9C0 903 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 NEDD1Q8NHV4 660 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 JAKMIP2Q96AA8 810 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 CEP295NLQ96MC4 621 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 MCMBPQ9BTE3 642 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 DNAJC18Q9H819 358 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 LMBRD1Q9NUN5 540 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 CD2APQ9Y5K6 639 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 PPP2R3BQ9Y5P8 575 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 TTC3P53804 2025 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 A0A087WUV0 522 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 GOLGA6L4A6NEF3 574 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 POTECB2RU33 542 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 HMMRO75330 724 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 BBOX1O75936 387 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 BTG3Q14201 252 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 PROSER3Q2NL68 480 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 RELL1Q8IUW5 271 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 SEZ6LQ9BYH1 1024 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 NFKBIZQ9BYH8 718 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 PRDM10Q9NQV6 1147 aa3.22□□□□□ -1.89
NEDD4-204ENST00000503468 DDX19AQ9NUU7 478 aaKnown RBP3.22□□□□□ -1.89
NEDD4-204ENST00000503468 UMODL1Q5DID0 1318 aa3.21□□□□□ -1.89
NEDD4-204ENST00000503468 ANAPC1Q9H1A4 1944 aa3.21□□□□□ -1.89
NEDD4-204ENST00000503468 MYO1CO00159 1063 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 POLR3GO15318 223 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PPFIA3O75145 1194 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MCM3P25205 808 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MAP2K2P36507 400 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 UBE2HP62256 183 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 TTC31Q49AM3 519 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 KIAA1328Q86T90 577 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 LARGE2Q8N3Y3 721 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 SLC43A3Q8NBI5 491 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 DTX3LQ8TDB6 740 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 SLCO2A1Q92959 643 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MORF4L1Q9UBU8 362 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 COG6Q9Y2V7 657 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 NYNRINQ9P2P1 1898 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 CTAGE5O15320 804 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PLIN1O60240 522 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 RAVER1Q8IY67 606 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 EFCAB13Q8IY85 973 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 SECISBP2LQ93073 1101 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 ARFGAP3Q9NP61 516 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 ECHDC1Q9NTX5 307 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PNMA2Q9UL42 364 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC151A5D8V7 595 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 TNNT1P13805 278 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PHKA1P46020 1223 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PRIM1P49642 420 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 IRX1P78414 480 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 ZSCAN26Q16670 478 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 STOX1Q6ZVD7 989 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 FGD4Q96M96 766 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 SCAND2PQ9GZW5 306 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 GUCY1A2P33402 732 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 RDXP35241 583 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 COL9A3Q14050 684 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 ZKSCAN8Q15776 578 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 ARL6IP4Q66PJ3 421 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 SLC7A14Q8TBB6 771 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 AFG1LQ8WV93 481 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MTMR9Q96QG7 549 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 RBSNQ9H1K0 784 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 KBTBD4Q9NVX7 518 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms