RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	FGA	P02671	866 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ENOX1	Q8TC92	643 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KAZALD1	Q96I82	304 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	EPSTI1	Q96J88	318 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	CCDC43	Q96MW1	224 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RIPOR2	Q9Y4F9	1068 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	CDKL5	O76039	1030 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KIF4A	O95239	1232 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	GYPC	P04921	128 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	NNT	Q13423	1086 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	OSBP2	Q969R2	916 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PANX2	Q96RD6	677 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	USP32	Q8NFA0	1604 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RNF113A	O15541	343 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	TUBB	P07437	444 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	EXOSC10	Q01780	885 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SATB1	Q01826	763 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SSRP1	Q08945	709 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	TBX2	Q13207	712 aa	Predicted RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SWT1	Q5T5J6	900 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	USPL1	Q5W0Q7	1092 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	MICAL1	Q8TDZ2	1067 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ANKRD24	Q8TF21	1146 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	CARD10	Q9BWT7	1032 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	NBPF3	Q9H094	633 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SENP2	Q9HC62	589 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KLC4	Q9NSK0	619 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	DMGDH	Q9UI17	866 aa	Known RBP	11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	DUSP10	Q9Y6W6	482 aa		11.92	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	FER1L4	A9Z1Z3	1794 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PTPRM	P28827	1452 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	FLT4	P35916	1363 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597		A0A1B0GUA9	196 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KRT86	O43790	486 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RPS6KA5	O75582	802 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PLCD1	P51178	756 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	NR1I3	Q14994	352 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	TRIM22	Q8IYM9	498 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RNF217	Q8TC41	542 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PCDHB6	Q9Y5E3	794 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ADGRL3	Q9HAR2	1447 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RNF225	M0QZC1	329 aa	Predicted RBP	11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	MYBL1	P10243	752 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PAFAH1B1	P43034	410 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SPA17	Q15506	151 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	LRRC1	Q9BTT6	524 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	CSRNP2	Q9H175	543 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SLC12A7	Q9Y666	1083 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	NEDD4	P46934	1319 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	MYO1B	O43795	1136 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	NDUFA10	O95299	355 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	CALR	P27797	417 aa	Known RBP	11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ZNF174	Q15697	407 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RESP18	Q5W5W9	173 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SEC31B	Q9NQW1	1179 aa		11.91	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SMIM23	A6NLE4	172 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ENO4	A6NNW6	628 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	MEFV	O15553	781 aa	Predicted RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ARHGAP25	P42331	645 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	GSC	P56915	257 aa	Predicted RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KIF5A	Q12840	1032 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	SPATA1	Q5VX52	437 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	IQCE	Q6IPM2	695 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	THOC1	Q96FV9	657 aa	Known RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	HAUS7	Q99871	368 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	HAUS2	Q9NVX0	235 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	VPS54	Q9P1Q0	977 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ARHGEF10	O15013	1369 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PRPF6	O94906	941 aa	Known RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	HOXC9	P31274	260 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	HDLBP	Q00341	1268 aa	Known RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KRT31	Q15323	416 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	C8orf74	Q6P047	294 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	RASGRP2	Q7LDG7	609 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KRT26	Q7Z3Y9	468 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	CTAGE1	Q96RT6	745 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	NAA15	Q9BXJ9	866 aa	Known RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	TRIM6	Q9C030	488 aa	Predicted RBP	11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	ABHD10	Q9NUJ1	306 aa		11.9	□□□□□ -0.5
TRAPPC12-223	ENST00000497597	KIF1C	O43896	1103 aa	Known RBP	11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CLTA	P09496	248 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CD44	P16070	742 aa	Known RBP	11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	SNCB	Q16143	134 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TCP11	Q8WWU5	503 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TRIM47	Q96LD4	638 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CEP126	Q9P2H0	1117 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	AKR1B10	O60218	316 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	IGKV5-2	P06315	115 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	VAV2	P52735	878 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	GCKR	Q14397	625 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	PPP1R7	Q15435	360 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	MSL1	Q68DK7	614 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	TAX1BP1	Q86VP1	789 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	SGSM3	Q96HU1	749 aa		11.89	□□□□□ -0.51
TRAPPC12-223	ENST00000497597	NCK2	O43639	380 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms