RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ECE1P42892 770 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 ZNF157P51786 506 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 ICA1Q05084 483 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 DGKZQ13574 1117 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 CYP4F22Q6NT55 531 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 ZHX2Q9Y6X8 837 aa12.7□□□□□ -0.38
CACNA1C-227ENST00000491104 TNKSO95271 1327 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 A0A1W2PRG0 241 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 TRIM75PA6NK02 468 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 PRC1O43663 620 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 EEF2P13639 858 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 SPP2Q13103 211 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 KRT32Q14532 448 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 SIAH1Q8IUQ4 282 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
CACNA1C-227ENST00000491104 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 IRF6O14896 467 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 SLC10A3P09131 477 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 HSPA6P17066 643 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 PPATQ06203 517 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 LRRC47Q8N1G4 583 aaKnown RBP12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 ZIC5Q96T25 663 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 KANSL2Q9H9L4 492 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 GINM1Q9NU53 330 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 AFG3L2Q9Y4W6 797 aa12.68□□□□□ -0.38
CACNA1C-227ENST00000491104 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 RPS6KB1P23443 525 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 MCM5P33992 734 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 ANAPC15P60006 121 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 PPIL2Q13356 520 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 MTMR2Q13614 643 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 SEC23AQ15436 765 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 RASGRP2Q7LDG7 609 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 ENAHQ8N8S7 591 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 ZNF280CQ8ND82 737 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 CAPNS2Q96L46 248 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 KIF2CQ99661 725 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 FEZ1Q99689 392 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 UBAC1Q9BSL1 405 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 TCP11L1Q9NUJ3 509 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
CACNA1C-227ENST00000491104 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 RAD21O60216 631 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 AOC2O75106 756 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 TTLL1O95922 423 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 PSMA5P28066 241 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 EXOSC10Q01780 885 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 TMEM67Q5HYA8 995 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 KIAA1755Q5JYT7 1200 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 Q6ZUG5 572 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 NYAP2Q9P242 653 aa12.66□□□□□ -0.38
CACNA1C-227ENST00000491104 NOVP48745 357 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 HMGCS2P54868 508 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 WTAPQ15007 396 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 IL17RAQ96F46 866 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 TM6SF1Q9BZW5 370 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 LY9Q9HBG7 655 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 KCNH4Q9UQ05 1017 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
CACNA1C-227ENST00000491104 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 CCL15-CCL14A0A0B4J2E2 113 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 ERICH2A1L162 156 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms