RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
ITGB1-215ENST00000488494 POTEFA5A3E0 1075 aa21.31■■□□□ 1
ITGB1-215ENST00000488494 M0R2C6 588 aa21.31■■□□□ 1
ITGB1-215ENST00000488494 MYCP01106 439 aaPredicted RBP21.31■■□□□ 1
ITGB1-215ENST00000488494 HOXA7P31268 230 aaPredicted RBP21.31■■□□□ 1
ITGB1-215ENST00000488494 C12orf42Q96LP6 360 aa21.31■■□□□ 1
ITGB1-215ENST00000488494 KIAA1683Q9H0B3 1180 aa21.31■■□□□ 1
ITGB1-215ENST00000488494 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
ITGB1-215ENST00000488494 TAOK2Q9UL54 1235 aa21.31■■□□□ 1
ITGB1-215ENST00000488494 GPAA1O43292 621 aa21.3■■□□□ 1
ITGB1-215ENST00000488494 HERVK_113P62684 666 aa21.3■■□□□ 1
ITGB1-215ENST00000488494 LRRFIP1Q32MZ4 808 aaKnown RBP21.3■■□□□ 1
ITGB1-215ENST00000488494 CTR9Q6PD62 1173 aa21.3■■□□□ 1
ITGB1-215ENST00000488494 GABRQQ9UN88 632 aa21.3■■□□□ 1
ITGB1-215ENST00000488494 AKR1B1P15121 316 aa21.29■■□□□ 1
ITGB1-215ENST00000488494 VCAM1P19320 739 aa21.29■■□□□ 1
ITGB1-215ENST00000488494 USP14P54578 494 aa21.29■■□□□ 1
ITGB1-215ENST00000488494 TMEM179Q6ZVK1 233 aa21.29■■□□□ 1
ITGB1-215ENST00000488494 C16orf86Q6ZW13 317 aa21.29■■□□□ 1
ITGB1-215ENST00000488494 CLEC10AQ8IUN9 316 aa21.29■■□□□ 1
ITGB1-215ENST00000488494 P2RX7Q99572 595 aaKnown RBP21.29■■□□□ 1
ITGB1-215ENST00000488494 GSG1L2A8MUP6 293 aa21.28■■□□□ 1
ITGB1-215ENST00000488494 PEX10O60683 326 aa21.28■■□□□ 1
ITGB1-215ENST00000488494 GRK4P32298 578 aa21.28■■□□□ 1
ITGB1-215ENST00000488494 CDK8P49336 464 aa21.28■■□□□ 1
ITGB1-215ENST00000488494 LNPKQ9C0E8 428 aa21.28■■□□□ 1
ITGB1-215ENST00000488494 RWDD1Q9H446 243 aaPredicted RBP21.28■■□□□ 1
ITGB1-215ENST00000488494 EPB41L4AQ9HCS5 686 aaPredicted RBP21.28■■□□□ 1
ITGB1-215ENST00000488494 MORF4L1Q9UBU8 362 aa21.28■■□□□ 1
ITGB1-215ENST00000488494 SUPT16HQ9Y5B9 1047 aaKnown RBP21.28■■□□□ 1
ITGB1-215ENST00000488494 ROBO3Q96MS0 1386 aa21.27■■□□□ 1
ITGB1-215ENST00000488494 FLT3LGP49771 235 aa21.27■■□□□ 1
ITGB1-215ENST00000488494 PDE1AP54750 535 aa21.27■■□□□ 1
ITGB1-215ENST00000488494 TMEM106CQ9BVX2 250 aa21.27■■□□□ 1
ITGB1-215ENST00000488494 TXNRD2Q9NNW7 524 aa21.27■■□□□ 1
ITGB1-215ENST00000488494 STAP2Q9UGK3 403 aa21.27■■□□□ 1
ITGB1-215ENST00000488494 A0A1W2PRG0 241 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 GNAT2P19087 354 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 TDO2P48775 406 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 ICA1Q05084 483 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 GIMAP6Q6P9H5 292 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 SMC5Q8IY18 1101 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 COA7Q96BR5 231 aa21.26■□□□□ 0.99
ITGB1-215ENST00000488494 SEC62Q99442 399 aaKnown RBP21.26■□□□□ 0.99
ITGB1-215ENST00000488494 MKI67P46013 3256 aaKnown RBP21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L15C9J2P7 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L13C9JLJ4 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L11C9JVI0 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L18D6R9N7 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L22D6RA61 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L17D6RBQ6 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L19D6RCP7 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L20D6RJB6 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 USP17L24Q0WX57 530 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 SLAIN1Q8ND83 568 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 GTF3C2Q8WUA4 911 aaPredicted RBP21.25■□□□□ 0.99
ITGB1-215ENST00000488494 CCDC17Q96LX7 622 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 PAGR1Q9BTK6 254 aa21.25■□□□□ 0.99
ITGB1-215ENST00000488494 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
ITGB1-215ENST00000488494 BIN2Q9UBW5 565 aaPredicted RBP21.25■□□□□ 0.99
ITGB1-215ENST00000488494 MINDY4BA8MYZ0 360 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 ADCY3O60266 1144 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 IGHDP01880 384 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 APPP05067 770 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 ELNP15502 786 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 EN2P19622 333 aaPredicted RBP21.24■□□□□ 0.99
ITGB1-215ENST00000488494 SBK1Q52WX2 424 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 ZMYM1Q5SVZ6 1142 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 STK11IPQ8N1F8 1099 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 GPRC5AQ8NFJ5 357 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 ARHGEF10LQ9HCE6 1279 aa21.24■□□□□ 0.99
ITGB1-215ENST00000488494 ERVK-9P63128 1117 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 ERVK-24P63145 666 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 IRF5Q13568 498 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 MTFR1Q15390 333 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 POTEEQ6S8J3 1075 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 CATSPERGQ6ZRH7 1159 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 EVI5LQ96CN4 794 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 RBPJLQ9UBG7 517 aa21.23■□□□□ 0.99
ITGB1-215ENST00000488494 GREB1LQ9C091 1923 aaPredicted RBP21.23■□□□□ 0.99
ITGB1-215ENST00000488494 A0A0G2JMZ2 1700 aa21.22■□□□□ 0.99
ITGB1-215ENST00000488494 CCDC129Q6ZRS4 1044 aa21.22■□□□□ 0.99
ITGB1-215ENST00000488494 TANGO6Q9C0B7 1094 aa21.22■□□□□ 0.99
ITGB1-215ENST00000488494 SH2D4AQ9H788 454 aa21.22■□□□□ 0.99
ITGB1-215ENST00000488494 PLXNB2O15031 1838 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 RASA1P20936 1047 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 UBXN2AP68543 259 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 NUCB1Q02818 461 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 KIAA1755Q5JYT7 1200 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 CHD1LQ86WJ1 897 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 SIAH1Q8IUQ4 282 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 NACAP1Q9BZK3 213 aa21.21■□□□□ 0.99
ITGB1-215ENST00000488494 KIAA0100Q14667 2235 aaKnown RBP21.21■□□□□ 0.99
ITGB1-215ENST00000488494 SPDYE16A6NNV3 312 aaPredicted RBP21.2■□□□□ 0.98
ITGB1-215ENST00000488494 PATL2C9JE40 543 aaKnown RBP21.2■□□□□ 0.98
ITGB1-215ENST00000488494 CNMDO75829 334 aa21.2■□□□□ 0.98
ITGB1-215ENST00000488494 INHAP05111 366 aa21.2■□□□□ 0.98
ITGB1-215ENST00000488494 CCL5P13501 91 aa21.2■□□□□ 0.98
ITGB1-215ENST00000488494 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms