RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 ISCA1Q9BUE6 129 aa11.35□□□□□ -0.59
TMF1-203ENST00000488010 FOXP1Q9H334 677 aaPredicted RBP11.35□□□□□ -0.59
TMF1-203ENST00000488010 PHRF1Q9P1Y6 1649 aaKnown RBP11.35□□□□□ -0.59
TMF1-203ENST00000488010 ANKRD18BA2A2Z9 1011 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 AKNAD1Q5T1N1 836 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 TTLL11Q8NHH1 800 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 CAPZA3Q96KX2 299 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 L1RE1Q9UN81 338 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 TFR2Q9UP52 801 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 LIFRP42702 1097 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 ERVK-24P63145 666 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 APTXQ7Z2E3 356 aaKnown RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 CERS3Q8IU89 383 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 UBAC1Q9BSL1 405 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 RIPOR2Q9Y4F9 1068 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 STK36Q9NRP7 1315 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 RNF225M0QZC1 329 aaPredicted RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 ZMYND10O75800 440 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 SLC20A2Q08357 652 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 EARS2Q5JPH6 523 aaKnown RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 HDAC6Q9UBN7 1215 aa11.34□□□□□ -0.59
TMF1-203ENST00000488010 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
TMF1-203ENST00000488010 KRT9P35527 623 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 DPYDQ12882 1025 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 KRT23Q9C075 422 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 FAM204AQ9H8W3 233 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
TMF1-203ENST00000488010 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
TMF1-203ENST00000488010 KRT31Q15323 416 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
TMF1-203ENST00000488010 ZNF654Q8IZM8 581 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 MSANTD4Q8NCY6 345 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 HNRNPLLQ8WVV9 542 aaKnown RBP11.33□□□□□ -0.6
TMF1-203ENST00000488010 MYO6Q9UM54 1294 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 IQSEC3Q9UPP2 1182 aaPredicted RBP11.33□□□□□ -0.6
TMF1-203ENST00000488010 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 WNT7AO00755 349 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 MAP3K12Q12852 859 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 CUL4BQ13620 913 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 LCORLQ8N3X6 602 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
TMF1-203ENST00000488010 GBP3Q9H0R5 595 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 ABHD10Q9NUJ1 306 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 PSD3Q9NYI0 1048 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 RAB21Q9UL25 225 aa11.33□□□□□ -0.6
TMF1-203ENST00000488010 IVLP07476 585 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 HLFQ16534 295 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
TMF1-203ENST00000488010 CCDC148Q8NFR7 591 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 CHP1Q99653 195 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 TRMT112Q9UI30 125 aaKnown RBP11.32□□□□□ -0.6
TMF1-203ENST00000488010 SPEF2Q9C093 1822 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 CCDC196A0A1B0GTZ2 297 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 PPP1R3GB7ZBB8 358 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 SMIM22K7EJ46 135 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 PDE8BO95263 885 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 UBXN1Q04323 297 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 WHAMMP3Q1A5X7 153 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 GSPT2Q8IYD1 628 aaKnown RBP11.32□□□□□ -0.6
TMF1-203ENST00000488010 ELOA2Q8IYF1 753 aaPredicted RBP11.32□□□□□ -0.6
TMF1-203ENST00000488010 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
TMF1-203ENST00000488010 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
TMF1-203ENST00000488010 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 IRS4O14654 1257 aaPredicted RBP11.31□□□□□ -0.6
TMF1-203ENST00000488010 USP5P45974 858 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 CDKAL1Q5VV42 579 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 CYP26C1Q6V0L0 522 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
TMF1-203ENST00000488010 EEF2KMTQ96G04 330 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 KIF1AQ12756 1690 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 TCRBV5S4A2TA0A5A2 114 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 CSF1RP07333 972 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 XBP1P17861 261 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 KRT2P35908 639 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 PBX1P40424 430 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 CAGE1Q8TC20 777 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 RNF40O75150 1001 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms