RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.2
TNRC6A-206ENST00000477487 TCP10L2B9ZVM9 353 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 JAG1P78504 1218 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 HMGN5P82970 282 aaKnown RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 RSBN1LQ6PCB5 846 aaPredicted RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 GMLQ99445 158 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 PLCG2P16885 1265 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 PDCP20941 246 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 GABPAQ06546 454 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 FUT2Q10981 343 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 ZNF444Q8N0Y2 327 aaPredicted RBP13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 SUPT20HQ8NEM7 779 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 CEP95Q96GE4 821 aa13.77□□□□□ -0.21
TNRC6A-206ENST00000477487 MYH6P13533 1939 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 SHMT1P34896 483 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 TAOK3Q9H2K8 898 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 PSME4Q14997 1843 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 GOLGA6L22H0YM25 854 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 VIL1P09327 827 aaKnown RBP13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 KRT40Q6A162 431 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 ZSCAN29Q8IWY8 852 aaPredicted RBP13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 CRACR2BQ8N4Y2 399 aaPredicted RBP13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 USP28Q96RU2 1077 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
TNRC6A-206ENST00000477487 PKN1Q16512 942 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 OXER1Q8TDS5 423 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 ZNRF3Q9ULT6 936 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 MYH8P13535 1937 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 LRRC47Q8N1G4 583 aaKnown RBP13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
TNRC6A-206ENST00000477487 MYH15Q9Y2K3 1946 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 IFNAR1P17181 557 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 CATIPQ7Z7H3 387 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 FHDC1Q9C0D6 1143 aaPredicted RBP13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 VPS54Q9P1Q0 977 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 GDF11O95390 407 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 KLHL40Q2TBA0 621 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 USP17L2Q6R6M4 530 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 AMOTL1Q8IY63 956 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 PGBD1Q96JS3 809 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
TNRC6A-206ENST00000477487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 NR5A1Q13285 461 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 BTBD18B2RXH4 712 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 KIF23Q02241 960 aaPredicted RBP13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 EARS2Q5JPH6 523 aaKnown RBP13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 LEO1Q8WVC0 666 aaPredicted RBP13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
TNRC6A-206ENST00000477487 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 CYTH3O43739 400 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 ATP2B2Q01814 1243 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 TMTC3Q6ZXV5 915 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 ZNF541Q9H0D2 1346 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 NID2Q14112 1375 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 LIG1P18858 919 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 GPKOWQ92917 476 aaPredicted RBP eCLIP13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 TMEM39BQ9GZU3 492 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
TNRC6A-206ENST00000477487 USP17L5A8MUK1 530 aa13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 WNT7AO00755 349 aa13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 PTMSP20962 102 aa13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 CCDC84Q86UT8 332 aaPredicted RBP13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 SECISBP2LQ93073 1101 aaKnown RBP13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.21
TNRC6A-206ENST00000477487 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms