RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DNAJC25-GNG10A0A024R161 153 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.37□□□□□ -1.23
UBR3-209ENST00000477461 LRRN2O75325 713 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 BPNT1O95861 308 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 F13A1P00488 732 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 ETV3P41162 512 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 KIR3DL1P43629 444 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 ST13P50502 369 aaKnown RBP7.37□□□□□ -1.23
UBR3-209ENST00000477461 FAM160A1Q05DH4 1040 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 MESP2Q0VG99 397 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 RALGPS1Q5JS13 557 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 FAM13CQ8NE31 585 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 ALPK1Q96QP1 1244 aa7.37□□□□□ -1.23
UBR3-209ENST00000477461 GRIN3BO60391 1043 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 SORBS3O60504 671 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 ESR1P03372 595 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 TPP2P29144 1249 aaPredicted RBP7.36□□□□□ -1.23
UBR3-209ENST00000477461 GDNFP39905 211 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 HK2P52789 917 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 ERVFC1P60507 584 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 FBXO33Q7Z6M2 555 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 RELL1Q8IUW5 271 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 PPP1R13LQ8WUF5 828 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 FAM84AQ96KN4 292 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 DUSP15Q9H1R2 295 aaPredicted RBP7.36□□□□□ -1.23
UBR3-209ENST00000477461 MRS2Q9HD23 443 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 FAM53CQ9NYF3 392 aa7.36□□□□□ -1.23
UBR3-209ENST00000477461 FAM221AA4D161 298 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 DBX1A6NMT0 343 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 CHURC1-FNTBB4DL54 471 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 CILPO75339 1184 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 GLI1P08151 1106 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 DIRC2Q96SL1 478 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 GZF1Q9H116 711 aaPredicted RBP7.35□□□□□ -1.23
UBR3-209ENST00000477461 ADAMTS10Q9H324 1103 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 KLHL3Q9UH77 587 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 ADAM30Q9UKF2 790 aa7.35□□□□□ -1.23
UBR3-209ENST00000477461 TNNI2P48788 182 aa7.34□□□□□ -1.23
UBR3-209ENST00000477461 LMNB2Q03252 620 aa7.34□□□□□ -1.23
UBR3-209ENST00000477461 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
UBR3-209ENST00000477461 FBXO27Q8NI29 283 aa7.34□□□□□ -1.23
UBR3-209ENST00000477461 GATAD2BQ8WXI9 593 aa7.34□□□□□ -1.23
UBR3-209ENST00000477461 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
UBR3-209ENST00000477461 TLR3O15455 904 aaKnown RBP7.33□□□□□ -1.24
UBR3-209ENST00000477461 TRHRP34981 398 aaPredicted RBP7.33□□□□□ -1.24
UBR3-209ENST00000477461 GOLM1Q8NBJ4 401 aa7.33□□□□□ -1.24
UBR3-209ENST00000477461 BAHD1Q8TBE0 780 aaPredicted RBP7.33□□□□□ -1.24
UBR3-209ENST00000477461 PIWIL2Q8TC59 973 aaKnown RBP7.33□□□□□ -1.24
UBR3-209ENST00000477461 CYB5D2Q8WUJ1 264 aa7.33□□□□□ -1.24
UBR3-209ENST00000477461 TMEM74Q96NL1 305 aa7.33□□□□□ -1.24
UBR3-209ENST00000477461 REV1Q9UBZ9 1251 aa7.33□□□□□ -1.24
UBR3-209ENST00000477461 YARSP54577 528 aaKnown RBP7.32□□□□□ -1.24
UBR3-209ENST00000477461 SNAP47Q5SQN1 464 aa7.32□□□□□ -1.24
UBR3-209ENST00000477461 SYDE1Q6ZW31 735 aaPredicted RBP7.32□□□□□ -1.24
UBR3-209ENST00000477461 TMPRSS7Q7RTY8 843 aa7.32□□□□□ -1.24
UBR3-209ENST00000477461 CCDC84Q86UT8 332 aaPredicted RBP7.32□□□□□ -1.24
UBR3-209ENST00000477461 DTWD2Q8NBA8 298 aa7.32□□□□□ -1.24
UBR3-209ENST00000477461 ABHD4Q8TB40 342 aa7.32□□□□□ -1.24
UBR3-209ENST00000477461 CRELD1Q96HD1 420 aa7.32□□□□□ -1.24
UBR3-209ENST00000477461 NSUN3Q9H649 340 aaKnown RBP7.32□□□□□ -1.24
UBR3-209ENST00000477461 POLR3KQ9Y2Y1 108 aaPredicted RBP7.32□□□□□ -1.24
UBR3-209ENST00000477461 EGR3Q06889 387 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 RHOVQ96L33 236 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 RSRP1Q9BUV0 290 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 COPRSQ9NQ92 184 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 GPATCH2Q9NW75 528 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 TMEM59LQ9UK28 342 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
UBR3-209ENST00000477461 DNAJA2O60884 412 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 HTR3BO95264 441 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 RAC2P15153 192 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 TMEM201Q5SNT2 666 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 PHACTR4Q8IZ21 702 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 MYLIPQ8WY64 445 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 CCDC120Q96HB5 630 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 KIF2CQ99661 725 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
UBR3-209ENST00000477461 C19orf44Q9H6X5 657 aa7.3□□□□□ -1.24
UBR3-209ENST00000477461 LTKP29376 864 aa7.29□□□□□ -1.24
UBR3-209ENST00000477461 RAP1GAPP47736 663 aa7.29□□□□□ -1.24
UBR3-209ENST00000477461 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
UBR3-209ENST00000477461 GAB4Q2WGN9 574 aa7.29□□□□□ -1.24
UBR3-209ENST00000477461 KBTBD4Q9NVX7 518 aa7.29□□□□□ -1.24
UBR3-209ENST00000477461 SRFP11831 508 aa7.28□□□□□ -1.24
UBR3-209ENST00000477461 TSPYL5Q86VY4 417 aaPredicted RBP7.28□□□□□ -1.24
UBR3-209ENST00000477461 HOMEZQ8IX15 550 aa7.28□□□□□ -1.24
UBR3-209ENST00000477461 CCDC74BQ96LY2 380 aa7.28□□□□□ -1.24
UBR3-209ENST00000477461 KREMEN1Q96MU8 473 aa7.28□□□□□ -1.24
UBR3-209ENST00000477461 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
UBR3-209ENST00000477461 PCDHA11Q9Y5I1 949 aa7.28□□□□□ -1.24
UBR3-209ENST00000477461 SHISA3A0PJX4 238 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 C1QTNF9P0C862 333 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 GARTP22102 1010 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 GBP1P32455 592 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 CHMP4BP1P59074 171 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 PWP1Q13610 501 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 FBXL19Q6PCT2 694 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms