RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SLC15A2Q16348 729 aa25.06■■□□□ 1.6
CCM2-206ENST00000474617 FAM47AQ5JRC9 791 aa25.06■■□□□ 1.6
CCM2-206ENST00000474617 C2CD5Q86YS7 1000 aa25.06■■□□□ 1.6
CCM2-206ENST00000474617 CKAP2LQ8IYA6 745 aa25.06■■□□□ 1.6
CCM2-206ENST00000474617 ZNF579Q8NAF0 562 aaKnown RBP25.06■■□□□ 1.6
CCM2-206ENST00000474617 NAT10Q9H0A0 1025 aaKnown RBP25.06■■□□□ 1.6
CCM2-206ENST00000474617 NOL7Q9UMY1 257 aaKnown RBP25.06■■□□□ 1.6
CCM2-206ENST00000474617 C10orf71Q711Q0 1435 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 BTBD18B2RXH4 712 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 CALML3P27482 149 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 SMARCA1P28370 1054 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 HDLBPQ00341 1268 aaKnown RBP25.05■■□□□ 1.6
CCM2-206ENST00000474617 GRM4Q14833 912 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 PKN1Q16512 942 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 MAPKAPK5Q8IW41 473 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 KRI1Q8N9T8 703 aaKnown RBP25.05■■□□□ 1.6
CCM2-206ENST00000474617 NEDD1Q8NHV4 660 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 SDF4Q9BRK5 362 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 USP25Q9UHP3 1055 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 DAGLAQ9Y4D2 1042 aa25.05■■□□□ 1.6
CCM2-206ENST00000474617 PLIN4Q96Q06 1357 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 SMIM22K7EJ46 135 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 TPM3P06753 285 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 TRAPPC10P48553 1259 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 ZRSR1Q15695 479 aaKnown RBP25.04■■□□□ 1.6
CCM2-206ENST00000474617 GALNT17Q6IS24 598 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 PNMA1Q8ND90 353 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 SUPT20HQ8NEM7 779 aa25.04■■□□□ 1.6
CCM2-206ENST00000474617 V9GY48 417 aaPredicted RBP25.04■■□□□ 1.6
CCM2-206ENST00000474617 CLCN1P35523 988 aa25.03■■□□□ 1.6
CCM2-206ENST00000474617 PFKFB3Q16875 520 aaPredicted RBP25.03■■□□□ 1.6
CCM2-206ENST00000474617 ANO6Q4KMQ2 910 aa25.03■■□□□ 1.6
CCM2-206ENST00000474617 SWAP70Q9UH65 585 aa25.03■■□□□ 1.6
CCM2-206ENST00000474617 HOOK1Q9UJC3 728 aaKnown RBP25.03■■□□□ 1.6
CCM2-206ENST00000474617 HPSEQ9Y251 543 aa25.03■■□□□ 1.6
CCM2-206ENST00000474617 SCG2P13521 617 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 RASA1P20936 1047 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 CDK8P49336 464 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 NDUFA8P51970 172 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 RESP18Q5W5W9 173 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 CAMKK2Q96RR4 588 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 PLEKHA8P1O95397 391 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 NOVP48745 357 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 ZNF165P49910 485 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 SLC51AQ86UW1 340 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 ZNF622Q969S3 477 aaKnown RBP eCLIP25.02■■□□□ 1.6
CCM2-206ENST00000474617 TEKT1Q969V4 418 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 CCDC34Q96HJ3 373 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 IL17RBQ9NRM6 502 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 KCNJ14Q9UNX9 436 aa25.02■■□□□ 1.6
CCM2-206ENST00000474617 MYH1P12882 1939 aa25.01■■□□□ 1.59
CCM2-206ENST00000474617 RIMBP2O15034 1052 aa25.01■■□□□ 1.59
CCM2-206ENST00000474617 ZNF202O95125 648 aa25.01■■□□□ 1.59
CCM2-206ENST00000474617 MSNP26038 577 aaKnown RBP25.01■■□□□ 1.59
CCM2-206ENST00000474617 PLCD1P51178 756 aa25.01■■□□□ 1.59
CCM2-206ENST00000474617 STRIP1Q5VSL9 837 aa25.01■■□□□ 1.59
CCM2-206ENST00000474617 CCDC82Q8N4S0 544 aa25.01■■□□□ 1.59
CCM2-206ENST00000474617 SRBD1Q8N5C6 995 aaKnown RBP25.01■■□□□ 1.59
CCM2-206ENST00000474617 A0A1B0GVL5 298 aa25■■□□□ 1.59
CCM2-206ENST00000474617 PFKFB1P16118 471 aa25■■□□□ 1.59
CCM2-206ENST00000474617 PTPREP23469 700 aa25■■□□□ 1.59
CCM2-206ENST00000474617 SYKP43405 635 aa25■■□□□ 1.59
CCM2-206ENST00000474617 CEP57L1Q8IYX8 460 aa25■■□□□ 1.59
CCM2-206ENST00000474617 DYNLL2Q96FJ2 89 aa25■■□□□ 1.59
CCM2-206ENST00000474617 FAM13BQ9NYF5 915 aa25■■□□□ 1.59
CCM2-206ENST00000474617 KIAA1468Q9P260 1216 aa25■■□□□ 1.59
CCM2-206ENST00000474617 TTF2Q9UNY4 1162 aaKnown RBP25■■□□□ 1.59
CCM2-206ENST00000474617 TRIM75PA6NK02 468 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 GOLGA6L6A8MZA4 724 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 NMT2O60551 498 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 NPM3O75607 178 aaKnown RBP24.99■■□□□ 1.59
CCM2-206ENST00000474617 ADCY5O95622 1261 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 TOP1P11387 765 aaKnown RBP24.99■■□□□ 1.59
CCM2-206ENST00000474617 CCDC148Q8NFR7 591 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 BPIFA3Q9BQP9 254 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 CBX8Q9HC52 389 aa24.99■■□□□ 1.59
CCM2-206ENST00000474617 WDHD1O75717 1129 aaPredicted RBP24.98■■□□□ 1.59
CCM2-206ENST00000474617 CMTR1Q8N1G2 835 aaKnown RBP24.98■■□□□ 1.59
CCM2-206ENST00000474617 FERMT2Q96AC1 680 aa24.98■■□□□ 1.59
CCM2-206ENST00000474617 SRPRBQ9Y5M8 271 aaKnown RBP24.98■■□□□ 1.59
CCM2-206ENST00000474617 SNED1Q8TER0 1413 aa24.98■■□□□ 1.59
CCM2-206ENST00000474617 GOLGA6L19H0YKK7 550 aa24.97■■□□□ 1.59
CCM2-206ENST00000474617 PTMAP06454 111 aaKnown RBP24.97■■□□□ 1.59
CCM2-206ENST00000474617 TOB1P50616 345 aaPredicted RBP24.97■■□□□ 1.59
CCM2-206ENST00000474617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.97■■□□□ 1.59
CCM2-206ENST00000474617 ZDHHC15Q96MV8 337 aa24.97■■□□□ 1.59
CCM2-206ENST00000474617 SPZ1Q9BXG8 430 aa24.97■■□□□ 1.59
CCM2-206ENST00000474617 VPS54Q9P1Q0 977 aa24.97■■□□□ 1.59
CCM2-206ENST00000474617 SAP30BPQ9UHR5 308 aaKnown RBP24.97■■□□□ 1.59
CCM2-206ENST00000474617 HLA-DOAP06340 250 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 MARCKSP29966 332 aaPredicted RBP24.96■■□□□ 1.59
CCM2-206ENST00000474617 KANK3Q6NY19 840 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 CCDC12Q8WUD4 166 aaPredicted RBP24.96■■□□□ 1.59
CCM2-206ENST00000474617 TMEM47Q9BQJ4 181 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 EHD4Q9H223 541 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 PALM3A6NDB9 673 aaPredicted RBP24.96■■□□□ 1.59
CCM2-206ENST00000474617 UBE2Q2LH0YL09 131 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 hCG_1984214I3L0E3 225 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 EVX2Q03828 476 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 GABPAQ06546 454 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms