RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 MYO6Q9UM54 1294 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 FAM169AQ9Y6X4 670 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 LOC102724428A0A0B4J2F2 783 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 LIG3P49916 1009 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 SIK1P57059 783 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 COG1Q8WTW3 980 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 MAP3K14Q99558 947 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 DBNDD2Q9BQY9 259 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
SAMM50-203ENST00000474323 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 FECHP22830 423 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 SARSP49591 514 aaKnown RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 USP14P54578 494 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 AMPD2Q01433 879 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 STIM1Q13586 685 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 HLFQ16534 295 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 RABL6Q3YEC7 729 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 FAM182BQ5T319 152 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 ZNF622Q969S3 477 aaKnown RBP eCLIP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 ERCC5P28715 1186 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 CCT5P48643 541 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 MORC3Q14149 939 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 POSTNQ15063 836 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 CNGA4Q8IV77 575 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 FAM76AQ8TAV0 307 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 SAMSN1Q9NSI8 373 aaKnown RBP16.43■□□□□ 0.22
SAMM50-203ENST00000474323 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
SAMM50-203ENST00000474323 MFAP3LO75121 409 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 TFRCP02786 760 aaKnown RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 GPTP24298 496 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 IRAK1P51617 712 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 FOXO4P98177 505 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 TACO1Q9BSH4 297 aaKnown RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 GPHNQ9NQX3 736 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 AFF2P51816 1311 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 PBX1P40424 430 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 ITPK1Q13572 414 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 GIGYF2Q6Y7W6 1299 aaKnown RBP16.42■□□□□ 0.22
SAMM50-203ENST00000474323 TMTC1Q8IUR5 882 aa16.42■□□□□ 0.22
SAMM50-203ENST00000474323 TEX33O43247 280 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 PTF1AQ7RTS3 328 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 APTXQ7Z2E3 356 aaKnown RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 BANK1Q8NDB2 785 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 A1CFQ9NQ94 594 aaKnown RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 FOXN1O15353 648 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 PLCD1P51178 756 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 PPFIA1Q13136 1202 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 SKIDA1Q1XH10 827 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 TTC39AQ5SRH9 613 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 GBP6Q6ZN66 633 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
SAMM50-203ENST00000474323 MED15Q96RN5 788 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 CRACR2AQ9BSW2 395 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 KAT14Q9H8E8 782 aa16.41■□□□□ 0.22
SAMM50-203ENST00000474323 PRC1O43663 620 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 INPP5BP32019 993 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 GGCXP38435 758 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 SETQ01105 290 aaPredicted RBP16.4■□□□□ 0.22
SAMM50-203ENST00000474323 INTS5Q6P9B9 1019 aaKnown RBP16.4■□□□□ 0.22
SAMM50-203ENST00000474323 KRI1Q8N9T8 703 aaKnown RBP16.4■□□□□ 0.22
SAMM50-203ENST00000474323 CPLX3Q8WVH0 158 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 SHTN1A0MZ66 631 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 GOLGA6CA6NDK9 693 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 GOLIM4O00461 696 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 GOLGA6DP0CG33 693 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 SLC9C2Q5TAH2 1124 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 NCAPH2Q6IBW4 605 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 PRPF38AQ8NAV1 312 aaKnown RBP16.4■□□□□ 0.22
SAMM50-203ENST00000474323 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
SAMM50-203ENST00000474323 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 GOLGA6AQ9NYA3 693 aa16.4■□□□□ 0.22
SAMM50-203ENST00000474323 ADD3Q9UEY8 706 aaKnown RBP16.4■□□□□ 0.22
SAMM50-203ENST00000474323 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
SAMM50-203ENST00000474323 MAST3O60307 1309 aa16.39■□□□□ 0.21
SAMM50-203ENST00000474323 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms