RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 ALDH1L2Q3SY69 923 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 ZKSCAN2Q63HK3 967 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 C3orf58Q8NDZ4 430 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 KLHDC7BQ96G42 594 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 COG3Q96JB2 828 aa10.46□□□□□ -0.73
LSG1-206ENST00000466391 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 KIF16BQ96L93 1317 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 SORBS3O60504 671 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 NEFMP07197 916 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
LSG1-206ENST00000466391 ZNF157P51786 506 aaPredicted RBP10.45□□□□□ -0.74
LSG1-206ENST00000466391 RIPK4P57078 832 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 RASSF7Q02833 373 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 LMOD3Q0VAK6 560 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 C19orf57Q0VDD7 668 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 NME9Q86XW9 330 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
LSG1-206ENST00000466391 KLHL23Q8NBE8 558 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 WNT8BQ93098 351 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 ZFYVE1Q9HBF4 777 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 OSGEPQ9NPF4 335 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 VTI1BQ9UEU0 232 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
LSG1-206ENST00000466391 CEP170BQ9Y4F5 1589 aaPredicted RBP10.44□□□□□ -0.74
LSG1-206ENST00000466391 TTC21BQ7Z4L5 1316 aa10.44□□□□□ -0.74
LSG1-206ENST00000466391 DLL1O00548 723 aa10.44□□□□□ -0.74
LSG1-206ENST00000466391 FAAP100Q0VG06 881 aa10.44□□□□□ -0.74
LSG1-206ENST00000466391 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
LSG1-206ENST00000466391 RPS26P11Q5JNZ5 115 aaPredicted RBP10.44□□□□□ -0.74
LSG1-206ENST00000466391 SHISA2Q6UWI4 295 aa10.44□□□□□ -0.74
LSG1-206ENST00000466391 ALYREFQ86V81 257 aaKnown RBP10.44□□□□□ -0.74
LSG1-206ENST00000466391 THEMISQ8N1K5 641 aaPredicted RBP10.44□□□□□ -0.74
LSG1-206ENST00000466391 PANK1Q8TE04 598 aa10.44□□□□□ -0.74
LSG1-206ENST00000466391 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
LSG1-206ENST00000466391 DDX3YO15523 660 aaKnown RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 ZNF853P0CG23 659 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 RLBP1P12271 317 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 PRKAR2BP31323 418 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 CD68P34810 354 aaPredicted RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 GSK3AP49840 483 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 GSTM4Q03013 218 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 FOXD4L6Q3SYB3 417 aaPredicted RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 FOXD4L3Q6VB84 417 aaPredicted RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 DZIP1LQ8IYY4 767 aaKnown RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 BCL11AQ9H165 835 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 IFT57Q9NWB7 429 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 GPN3Q9UHW5 284 aaPredicted RBP10.43□□□□□ -0.74
LSG1-206ENST00000466391 FMN2Q9NZ56 1722 aa10.43□□□□□ -0.74
LSG1-206ENST00000466391 KIF24Q5T7B8 1368 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 PEAK1Q9H792 1746 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 KRBA1A5PL33 1030 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 TM4SF5O14894 197 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 APBA3O96018 575 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 B3GALT4O96024 378 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 IGHDP01880 384 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 NLRP12P59046 1061 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 SUZ12Q15022 739 aaKnown RBP10.42□□□□□ -0.74
LSG1-206ENST00000466391 KCNK4Q9NYG8 393 aa10.42□□□□□ -0.74
LSG1-206ENST00000466391 ACEP12821 1306 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 IPO8O15397 1037 aaKnown RBP10.41□□□□□ -0.74
LSG1-206ENST00000466391 FBXO24O75426 580 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 SELPP16109 830 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 GNAI1P63096 354 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 IGF2-ASQ6U949 168 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 ATF7IPQ6VMQ6 1270 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 TPTE2Q6XPS3 522 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 ARHGAP45Q92619 1136 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
LSG1-206ENST00000466391 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
LSG1-206ENST00000466391 SOX17Q9H6I2 414 aaPredicted RBP10.41□□□□□ -0.74
LSG1-206ENST00000466391 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 DDX19BQ9UMR2 479 aa10.41□□□□□ -0.74
LSG1-206ENST00000466391 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
LSG1-206ENST00000466391 ARHGEF10O15013 1369 aa10.4□□□□□ -0.74
LSG1-206ENST00000466391 GDF11O95390 407 aa10.4□□□□□ -0.74
LSG1-206ENST00000466391 TRIM27P14373 513 aa10.4□□□□□ -0.74
LSG1-206ENST00000466391 HDAC1Q13547 482 aaPredicted RBP10.4□□□□□ -0.74
LSG1-206ENST00000466391 RWDD1Q9H446 243 aaPredicted RBP10.4□□□□□ -0.74
LSG1-206ENST00000466391 USP21Q9UK80 565 aa10.4□□□□□ -0.74
LSG1-206ENST00000466391 CHD2O14647 1828 aaKnown RBP10.4□□□□□ -0.75
LSG1-206ENST00000466391 PIK3C2AO00443 1686 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 ADAMTSL3P82987 1691 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 ADAM11O75078 769 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 CTSHP09668 335 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 MEI1Q5TIA1 1274 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 FTSJ3Q8IY81 847 aaKnown RBP10.39□□□□□ -0.75
LSG1-206ENST00000466391 TMEM151AQ8N4L1 468 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
LSG1-206ENST00000466391 NACC1Q96RE7 527 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 CHMP4BQ9H444 224 aaKnown RBP10.39□□□□□ -0.75
LSG1-206ENST00000466391 TMEM39AQ9NV64 488 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 PPM1HQ9ULR3 514 aa10.39□□□□□ -0.75
LSG1-206ENST00000466391 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
LSG1-206ENST00000466391 LMTK3Q96Q04 1460 aa10.38□□□□□ -0.75
LSG1-206ENST00000466391 SETD1BQ9UPS6 1966 aaKnown RBP10.38□□□□□ -0.75
LSG1-206ENST00000466391 CEBPAP49715 358 aaPredicted RBP10.38□□□□□ -0.75
LSG1-206ENST00000466391 PPP2R3AQ06190 1150 aa10.38□□□□□ -0.75
LSG1-206ENST00000466391 LENG1Q96BZ8 264 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms