RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 LAMB1P07942 1786 aa9.96□□□□□ -0.81
PGBD2-203ENST00000462488 PHIPQ8WWQ0 1821 aa9.96□□□□□ -0.81
PGBD2-203ENST00000462488 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 PSMC4P43686 418 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 USP14P54578 494 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 LACTBP83111 547 aaPredicted RBP9.96□□□□□ -0.82
PGBD2-203ENST00000462488 MOGSQ13724 837 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 C17orf99Q6UX52 265 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 CCDC129Q6ZRS4 1044 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 TMEM179Q6ZVK1 233 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 IFNL3Q8IZI9 196 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 ZNF444Q8N0Y2 327 aaPredicted RBP9.96□□□□□ -0.82
PGBD2-203ENST00000462488 ANKRD13CQ8N6S4 541 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 CCDC17Q96LX7 622 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 TOMM22Q9NS69 142 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 DIAPH3Q9NSV4 1193 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 BIN2Q9UBW5 565 aaPredicted RBP9.96□□□□□ -0.82
PGBD2-203ENST00000462488 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
PGBD2-203ENST00000462488 HPS5Q9UPZ3 1129 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
PGBD2-203ENST00000462488 PTPRFP10586 1907 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 AKR1B1P15121 316 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
PGBD2-203ENST00000462488 FCGRTP55899 365 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 ICA1Q05084 483 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 GABPAQ06546 454 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 PDE4BQ07343 736 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 MCMDC2Q4G0Z9 681 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 SH3D19Q5HYK7 790 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 C16orf86Q6ZW13 317 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 RAET1EQ8TD07 263 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 ACER1Q8TDN7 264 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 PAGR1Q9BTK6 254 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 ASCC2Q9H1I8 757 aaPredicted RBP9.95□□□□□ -0.82
PGBD2-203ENST00000462488 SH2D4AQ9H788 454 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 HELLSQ9NRZ9 838 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L15C9J2P7 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L13C9JLJ4 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L11C9JVI0 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L18D6R9N7 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L22D6RA61 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L17D6RBQ6 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L19D6RCP7 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L20D6RJB6 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 SMIM22K7EJ46 135 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 HIP1O00291 1037 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 TNPO2O14787 897 aaKnown RBP9.94□□□□□ -0.82
PGBD2-203ENST00000462488 PRDM1O75626 825 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 MYCP01106 439 aaPredicted RBP9.94□□□□□ -0.82
PGBD2-203ENST00000462488 GCLCP48506 637 aaPredicted RBP9.94□□□□□ -0.82
PGBD2-203ENST00000462488 USP17L24Q0WX57 530 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 NMIQ13287 307 aaPredicted RBP9.94□□□□□ -0.82
PGBD2-203ENST00000462488 SLC9C1Q4G0N8 1177 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 SBK1Q52WX2 424 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 WDR78Q5VTH9 848 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 CWC27Q6UX04 472 aaKnown RBP9.94□□□□□ -0.82
PGBD2-203ENST00000462488 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 FAM227BQ96M60 508 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 ARHGAP39Q9C0H5 1083 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
PGBD2-203ENST00000462488 GNRH1P01148 92 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 TSPY3P0CV98 308 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 TSPY8P0CW00 308 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 SDSP20132 328 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 SOX10P56693 466 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 CLEC10AQ8IUN9 316 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 SPICE1Q8N0Z3 855 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 COA7Q96BR5 231 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 P2RX7Q99572 595 aaKnown RBP9.93□□□□□ -0.82
PGBD2-203ENST00000462488 KIAA1683Q9H0B3 1180 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 OSBPL3Q9H4L5 887 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 RPAP3Q9H6T3 665 aaPredicted RBP9.93□□□□□ -0.82
PGBD2-203ENST00000462488 KANSL2Q9H9L4 492 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 EPB41L4AQ9HCS5 686 aaPredicted RBP9.93□□□□□ -0.82
PGBD2-203ENST00000462488 PTCH2Q9Y6C5 1203 aa9.93□□□□□ -0.82
PGBD2-203ENST00000462488 MYPNQ86TC9 1320 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 A0A0D9SFI3 127 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 CENPBP07199 599 aaPredicted RBP9.92□□□□□ -0.82
PGBD2-203ENST00000462488 BCRP11274 1271 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 EEF2P13639 858 aaKnown RBP9.92□□□□□ -0.82
PGBD2-203ENST00000462488 VCAM1P19320 739 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 PRMT2P55345 433 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 HERVK_113P62684 666 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 CTDSPL2Q05D32 466 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 PPARAQ07869 468 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 RRP12Q5JTH9 1297 aaKnown RBP9.92□□□□□ -0.82
PGBD2-203ENST00000462488 GPRC5AQ8NFJ5 357 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 GTF3C2Q8WUA4 911 aaPredicted RBP9.92□□□□□ -0.82
PGBD2-203ENST00000462488 TRIM47Q96LD4 638 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
PGBD2-203ENST00000462488 CTDP1Q9Y5B0 961 aaPredicted RBP9.92□□□□□ -0.82
PGBD2-203ENST00000462488 DDX60LQ5H9U9 1706 aaKnown RBP9.92□□□□□ -0.82
PGBD2-203ENST00000462488 CCDC171Q6TFL3 1326 aa9.91□□□□□ -0.82
PGBD2-203ENST00000462488 TSPY2A6NKD2 308 aa9.91□□□□□ -0.82
PGBD2-203ENST00000462488 RANBP6O60518 1105 aaKnown RBP9.91□□□□□ -0.82
PGBD2-203ENST00000462488 FLOT1O75955 427 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms