RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
USP54-207ENST00000451492 A0A0G2JMZ2 1700 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 C19orf81C9J6K1 198 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 USP17L21D6R901 530 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 RNF113AO15541 343 aaKnown RBP11.63□□□□□ -0.55
USP54-207ENST00000451492 AKR1B1P15121 316 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 ELNP15502 786 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 GRK4P32298 578 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 PRMT2P55345 433 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 HERVK_113P62684 666 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 GABPAQ06546 454 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 MTFR1Q15390 333 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
USP54-207ENST00000451492 APPBP2Q92624 585 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 OSBP2Q969R2 916 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 SEC62Q99442 399 aaKnown RBP11.63□□□□□ -0.55
USP54-207ENST00000451492 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
USP54-207ENST00000451492 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
USP54-207ENST00000451492 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 GPAA1O43292 621 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 GLRX3O76003 335 aaKnown RBP11.62□□□□□ -0.55
USP54-207ENST00000451492 APPP05067 770 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
USP54-207ENST00000451492 TDO2P48775 406 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 FLT3LGP49771 235 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 COA7Q96BR5 231 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 SWAP70Q9UH65 585 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 SUPT16HQ9Y5B9 1047 aaKnown RBP11.62□□□□□ -0.55
USP54-207ENST00000451492 RLFQ13129 1914 aa11.62□□□□□ -0.55
USP54-207ENST00000451492 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 RAD21O60216 631 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 ADCY3O60266 1144 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 VCAM1P19320 739 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 CDK8P49336 464 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 USP14P54578 494 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 ICA1Q05084 483 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 WDR78Q5VTH9 848 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 STRBPQ96SI9 672 aaKnown RBP11.61□□□□□ -0.55
USP54-207ENST00000451492 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
USP54-207ENST00000451492 RPAP3Q9H6T3 665 aaPredicted RBP11.61□□□□□ -0.55
USP54-207ENST00000451492 CWC22Q9HCG8 908 aaKnown RBP11.61□□□□□ -0.55
USP54-207ENST00000451492 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
USP54-207ENST00000451492 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
USP54-207ENST00000451492 SALL3Q9BXA9 1300 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 GSG1L2A8MUP6 293 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L15C9J2P7 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L13C9JLJ4 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L11C9JVI0 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L18D6R9N7 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L22D6RA61 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L17D6RBQ6 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L19D6RCP7 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L20D6RJB6 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 ZFYP08048 801 aaPredicted RBP11.6□□□□□ -0.55
USP54-207ENST00000451492 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
USP54-207ENST00000451492 UBXN2AP68543 259 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 USP17L24Q0WX57 530 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 HDAC1Q13547 482 aaPredicted RBP11.6□□□□□ -0.55
USP54-207ENST00000451492 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 TMEM179Q6ZVK1 233 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 C16orf86Q6ZW13 317 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 CCAR1Q8IX12 1150 aaKnown RBP11.6□□□□□ -0.55
USP54-207ENST00000451492 SPICE1Q8N0Z3 855 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
USP54-207ENST00000451492 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
USP54-207ENST00000451492 INHAP05111 366 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 CCL5P13501 91 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 ERVK-24P63145 666 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
USP54-207ENST00000451492 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 RNF208Q9H0X6 261 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 UNC93B1Q9H1C4 597 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 PORCNQ9H237 461 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 RWDD1Q9H446 243 aaPredicted RBP11.59□□□□□ -0.55
USP54-207ENST00000451492 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
USP54-207ENST00000451492 PLXNA1Q9UIW2 1896 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 PRDM1O75626 825 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 IGHDP01880 384 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 CYP2B6P20813 491 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 PDE1AP54750 535 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 Q3C1V9 767 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 CATSPERGQ6ZRH7 1159 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
USP54-207ENST00000451492 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms