RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 DYMQ7RTS9 669 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 C2CD5Q86YS7 1000 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 LRRC8AQ8IWT6 810 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 MAIP1Q8WWC4 291 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 STAMQ92783 540 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 NUF2Q9BZD4 464 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 KCNJ14Q9UNX9 436 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 MTMR6Q9Y217 621 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 DMRT2Q9Y5R5 561 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 ARHGEF35A5YM69 484 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 CCDC169A6NNP5 214 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 GOLGA8KD6RF30 607 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 E7EWF7 191 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 I3L4J1 428 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 BCRP11274 1271 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 CTNNA1P35221 906 aaKnown RBP8.62□□□□□ -1.03
NEDD9-204ENST00000448183 IL13P35225 146 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 RASA3Q14644 834 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 SEPT14Q6ZU15 432 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 IP6K1Q92551 441 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 ACSBG1Q96GR2 724 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 USP28Q96RU2 1077 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 HOMER3Q9NSC5 361 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 HYOU1Q9Y4L1 999 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 ASXL2Q76L83 1435 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 PSDA5PKW4 1024 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-204ENST00000448183 PPP2R5EQ16537 467 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 CABP7Q86V35 215 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 BCAS4Q8TDM0 211 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 CCT6BQ92526 530 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 ZNF274Q96GC6 653 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-204ENST00000448183 DESI2Q9BSY9 194 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 NLRC4Q9NPP4 1024 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 ABCC10Q5T3U5 1492 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 SH3TC1Q8TE82 1336 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 GCP02774 474 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 TCP1P17987 556 aaKnown RBP8.62□□□□□ -1.03
NEDD9-204ENST00000448183 STX2P32856 288 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 SP4Q02446 784 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 PPARDQ03181 441 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 MICAL1Q8TDZ2 1067 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 SUCLG2Q96I99 432 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 SH2D4AQ9H788 454 aa8.62□□□□□ -1.03
NEDD9-204ENST00000448183 USP19O94966 1318 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 EXOC3O60645 756 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 HARSP12081 509 aaKnown RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 ATP5JP18859 108 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GAS2L3Q86XJ1 694 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 CEP120Q8N960 986 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 TRIML1Q8N9V2 468 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 VEZTQ9HBM0 779 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 DNM3Q9UQ16 869 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 CHMP2AO43633 222 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 DNM2P50570 870 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 RBM6P78332 1123 aaKnown RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 DDB1Q16531 1140 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GABPB2Q8TAK5 448 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 FAM71BQ8TC56 605 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 LZTS2Q9BRK4 669 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 BLZF1Q9H2G9 400 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 ATP10BO94823 1461 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 ZNF853P0CG23 659 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 CMA1P23946 247 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 ADCY7P51828 1080 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GUCY2FP51841 1108 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 PSMD6Q15008 389 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 DCUN1D2Q6PH85 259 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 NELFCDQ8IXH7 590 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GOLGA5Q8TBA6 731 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 CAPS2Q9BXY5 557 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 PKD2L1Q9P0L9 805 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 TACC3Q9Y6A5 838 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 KCNJ18B7U540 433 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 TXNDC9O14530 226 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 HIP1RO75146 1068 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GNA14O95837 355 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GSPT1P15170 499 aaKnown RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 ERCC3P19447 782 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 HIBADHP31937 336 aaKnown RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 RFC1P35251 1148 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 SLC8A3P57103 927 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 TRPC3Q13507 836 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 KCNJ12Q14500 433 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 LONRF2Q1L5Z9 754 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 NCAPH2Q6IBW4 605 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 GPT2Q8TD30 523 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 EYA3Q99504 573 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 KLHL14Q9P2G3 628 aa8.61□□□□□ -1.03
NEDD9-204ENST00000448183 SAP30BPQ9UHR5 308 aaKnown RBP8.61□□□□□ -1.03
NEDD9-204ENST00000448183 NUP153P49790 1475 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms