RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 SRP68Q9UHB9 627 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 MCM7P33993 719 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 CCT5P48643 541 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 REXO1L1PQ8IX06 675 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 NOA1Q8NC60 698 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 DEF6Q9H4E7 631 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 FRMD3A2A2Y4 597 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 CSF1RP07333 972 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 SHC4Q6S5L8 630 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 NBPF5PQ86XG9 351 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 MACROD2A1Z1Q3 448 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 XBP1P17861 261 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 ATP1A2P50993 1020 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 SLC39A14Q15043 492 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 KCTD16Q68DU8 428 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 IQCA1Q86XH1 822 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 TNKSO95271 1327 aa11.25□□□□□ -0.61
CDC42SE1-202ENST00000439374 F8W031 263 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 YEATS4O95619 227 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 CAVIN2O95810 425 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 CCDC175P0C221 793 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 CYP2D6P10635 497 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 USP5P45974 858 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 PPARAQ07869 468 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 NCAPHQ15003 741 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 UBE3CQ15386 1083 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 DZIP1Q86YF9 867 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 ESR2Q92731 530 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 KRT23Q9C075 422 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 L2HGDHQ9H9P8 463 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 LY9Q9HBG7 655 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 MCM9Q9NXL9 1143 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 TAB2Q9NYJ8 693 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 EIF3CLB5ME19 914 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 N4BP3O15049 544 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 KLRK1P26718 216 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 CASP14P31944 242 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 ACTN2P35609 894 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 RBL2Q08999 1139 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 SRLQ86TD4 932 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 EPSTI1Q96J88 318 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 EIF3CQ99613 913 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 FUT8Q9BYC5 575 aa11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 OSBPL5Q9H0X9 879 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-202ENST00000439374 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CMA1P23946 247 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 FBXW10Q5XX13 1052 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 NOSTRINQ8IVI9 506 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 TMEM87BQ96K49 555 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTAGE15A4D2H0 777 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 ARHGAP6O43182 974 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTAGE8P0CG41 777 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 RNF187Q5TA31 235 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 RBM43Q6ZSC3 357 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 PIK3AP1Q6ZUJ8 805 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTAGE6Q86UF2 777 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 FOXP4Q8IVH2 680 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTAGE4Q8IX94 777 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CELF1Q92879 486 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 SMARCAL1Q9NZC9 954 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 JRKLQ9Y4A0 524 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 ERLIN1O75477 346 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 ITPK1Q13572 414 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 ADGRA1Q86SQ6 560 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 RGPD5Q99666 1765 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 CRACR2AQ9BSW2 395 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 IMPACTQ9P2X3 320 aa11.23□□□□□ -0.61
CDC42SE1-202ENST00000439374 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms