RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 SRRDQ9UH36 339 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 PTPRFP10586 1907 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 MYPNQ86TC9 1320 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 GSG1L2A8MUP6 293 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 M0R2C6 588 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 HOXA7P31268 230 aaPredicted RBP11.57□□□□□ -0.56
CTSA-205ENST00000419493 RGS19P49795 217 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 ATP2B2Q01814 1243 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 FAM110CQ1W6H9 321 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 TMEM179Q6ZVK1 233 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 SMC5Q8IY18 1101 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 ACER1Q8TDN7 264 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 RILPL2Q969X0 211 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 COA7Q96BR5 231 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 EVI5LQ96CN4 794 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 CCDC17Q96LX7 622 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 SEC62Q99442 399 aaKnown RBP11.57□□□□□ -0.56
CTSA-205ENST00000419493 P2RX7Q99572 595 aaKnown RBP11.57□□□□□ -0.56
CTSA-205ENST00000419493 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 KIAA1683Q9H0B3 1180 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 MKNK2Q9HBH9 465 aa11.57□□□□□ -0.56
CTSA-205ENST00000419493 BAZ2AQ9UIF9 1905 aaKnown RBP11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 PATL2C9JE40 543 aaKnown RBP11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 SMIM22K7EJ46 135 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 RAD21O60216 631 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 GUCY1A2P33402 732 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 GIMAP6Q6P9H5 292 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 C16orf86Q6ZW13 317 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 PAGR1Q9BTK6 254 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 STAP2Q9UGK3 403 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 SALL3Q9BXA9 1300 aa11.56□□□□□ -0.56
CTSA-205ENST00000419493 AKR1B1P15121 316 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 GRK4P32298 578 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 HERVK_113P62684 666 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 NUCB1Q02818 461 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 ICA1Q05084 483 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 PRKCZQ05513 592 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 ZMYM1Q5SVZ6 1142 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 IFNL3Q8IZI9 196 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
CTSA-205ENST00000419493 GPRC5AQ8NFJ5 357 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 NAPBQ9H115 298 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 ZNF287Q9HBT7 754 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
CTSA-205ENST00000419493 GABRQQ9UN88 632 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 ZSWIM8A7E2V4 1837 aa11.55□□□□□ -0.56
CTSA-205ENST00000419493 SLC3A2P08195 630 aaKnown RBP11.54□□□□□ -0.56
CTSA-205ENST00000419493 VCAM1P19320 739 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 FLT3LGP49771 235 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
CTSA-205ENST00000419493 CATSPERGQ6ZRH7 1159 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 CLEC10AQ8IUN9 316 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 C12orf42Q96LP6 360 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 RPAP3Q9H6T3 665 aaPredicted RBP11.54□□□□□ -0.56
CTSA-205ENST00000419493 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
CTSA-205ENST00000419493 DDX60LQ5H9U9 1706 aaKnown RBP11.53□□□□□ -0.56
CTSA-205ENST00000419493 A0A1W2PRG0 241 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 ADCY3O60266 1144 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 PEX10O60683 326 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 UBXN2AP68543 259 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 PLEKHM2Q8IWE5 1019 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 GTF3C2Q8WUA4 911 aaPredicted RBP11.53□□□□□ -0.56
CTSA-205ENST00000419493 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
CTSA-205ENST00000419493 TXNRD2Q9NNW7 524 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 LOC285556D6RIA3 1793 aa11.53□□□□□ -0.56
CTSA-205ENST00000419493 MYH8P13535 1937 aa11.52□□□□□ -0.56
CTSA-205ENST00000419493 PRDM1O75626 825 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 EEF2P13639 858 aaKnown RBP11.52□□□□□ -0.57
CTSA-205ENST00000419493 RASA1P20936 1047 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 ERVK-24P63145 666 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 PDE4BQ07343 736 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 PPARAQ07869 468 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 COG2Q14746 738 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 Q3C1V9 767 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 GOPCQ9HD26 462 aa11.52□□□□□ -0.57
CTSA-205ENST00000419493 HELLSQ9NRZ9 838 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms