RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 BACE1P56817 501 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 VPS53Q5VIR6 699 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 CCDC129Q6ZRS4 1044 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 PNMA3Q9UL41 463 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 AGTPBP1Q9UPW5 1226 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 UBE2Q2LH0YL09 131 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 CAPN2P17655 700 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 SMARCA1P28370 1054 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 INPP5BP32019 993 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 GMCL1Q96IK5 515 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 TMEM87BQ96K49 555 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP16-204ENST00000399976 IL25Q9H293 177 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 SAP30BPQ9UHR5 308 aaKnown RBP8.9□□□□□ -0.98
USP16-204ENST00000399976 RBM8AQ9Y5S9 174 aaKnown RBP8.9□□□□□ -0.98
USP16-204ENST00000399976 PLXNB2O15031 1838 aa8.9□□□□□ -0.98
USP16-204ENST00000399976 USP17L10C9JJH3 530 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 WDR46O15213 610 aaKnown RBP8.9□□□□□ -0.99
USP16-204ENST00000399976 TTLL1O95922 423 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 COPB2P35606 906 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 GJA5P36382 358 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.99
USP16-204ENST00000399976 PPP2R5BQ15173 497 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 ZNF444Q8N0Y2 327 aaPredicted RBP8.9□□□□□ -0.99
USP16-204ENST00000399976 TMTC2Q8N394 836 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 AGXT2Q9BYV1 514 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 GOPCQ9HD26 462 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 MTMR4Q9NYA4 1195 aa8.9□□□□□ -0.99
USP16-204ENST00000399976 GNRH1P01148 92 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 APPP05067 770 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 SNHG28P0DPA3 235 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 MCCP23508 829 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 VEGFBP49765 207 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 RRP1BQ14684 758 aaKnown RBP8.89□□□□□ -0.99
USP16-204ENST00000399976 NCOA7Q8NI08 942 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 MKNK2Q9HBH9 465 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 SLC27A2O14975 620 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 CYP21A2P08686 494 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 CYP2D6P10635 497 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 LIFRP42702 1097 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 GCLCP48506 637 aaPredicted RBP8.89□□□□□ -0.99
USP16-204ENST00000399976 PTH1RQ03431 593 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 MB21D2Q8IYB1 491 aaPredicted RBP8.89□□□□□ -0.99
USP16-204ENST00000399976 FAM177A1Q8N128 213 aaPredicted RBP8.89□□□□□ -0.99
USP16-204ENST00000399976 MB21D1Q8N884 522 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 USP26Q9BXU7 913 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 VCPKMTQ9H867 229 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 ADAMTS5Q9UNA0 930 aa8.89□□□□□ -0.99
USP16-204ENST00000399976 ATP2A1O14983 1001 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 EVCP57679 992 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 CREB3L3Q68CJ9 461 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 BTNL9Q6UXG8 535 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 IQCA1Q86XH1 822 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 IFNL1Q8IU54 200 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 ELP3Q9H9T3 547 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 GH2P01242 217 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 TOP1P11387 765 aaKnown RBP8.88□□□□□ -0.99
USP16-204ENST00000399976 AKR1B1P15121 316 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
USP16-204ENST00000399976 PSMA5P28066 241 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 OAZ1P54368 228 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 ICA1Q05084 483 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 TRDNQ13061 729 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 GPAT2Q6NUI2 795 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 MIGA2Q7L4E1 593 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 CLMNQ96JQ2 1002 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 MORF4L1Q9UBU8 362 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 E7EWF7 191 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 FMR1Q06787 632 aaKnown RBP eCLIP8.88□□□□□ -0.99
USP16-204ENST00000399976 SEC23AQ15436 765 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 C8orf34Q49A92 452 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 SGMS1Q86VZ5 419 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 SIAH1Q8IUQ4 282 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 SAMD3Q8N6K7 520 aa8.88□□□□□ -0.99
USP16-204ENST00000399976 PARK7Q99497 189 aaKnown RBP8.88□□□□□ -0.99
USP16-204ENST00000399976 LRRC37A2A6NM11 1700 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 MINDY4BA8MYZ0 360 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 TSPY3P0CV98 308 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 TSPY8P0CW00 308 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 RBM25P49756 843 aaKnown RBP8.87□□□□□ -0.99
USP16-204ENST00000399976 PRMT2P55345 433 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 FAM160B2Q86V87 743 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 ZKSCAN4Q969J2 545 aaPredicted RBP8.87□□□□□ -0.99
USP16-204ENST00000399976 ZNF408Q9H9D4 720 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 TMOD4Q9NZQ9 345 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 NEDD4P46934 1319 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 MYH6P13533 1939 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L15C9J2P7 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L13C9JLJ4 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L11C9JVI0 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L18D6R9N7 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L22D6RA61 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L17D6RBQ6 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L19D6RCP7 530 aa8.87□□□□□ -0.99
USP16-204ENST00000399976 USP17L20D6RJB6 530 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms