RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 KIFC2Q96AC6 838 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 CUEDC2Q9H467 287 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 ARMT1Q9H993 441 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 BACH1O14867 736 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 ATP8B1O43520 1251 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 BIRC3Q13489 604 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 KDM5CP41229 1560 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC160A6NGH7 325 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 OTUD6AQ7L8S5 288 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 LMBRD1Q9NUN5 540 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 DISP1Q96F81 1524 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 F8W031 263 aaPredicted RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 PFKFB2O60825 505 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 RBM6P78332 1123 aaKnown RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 VEZTQ9HBM0 779 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 USP19O94966 1318 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 ARHGAP31Q2M1Z3 1444 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 CASQ2O14958 399 aaPredicted RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 ARL1P40616 181 aaPredicted RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 PLS1Q14651 629 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 KRT40Q6A162 431 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 CHST3Q7LGC8 479 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 SNX29Q8TEQ0 813 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 TRERF1Q96PN7 1200 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 TYW1Q9NV66 732 aaKnown RBP9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
SPTLC3-201ENST00000399002 hCG_1984214I3L0E3 225 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 MAN1A1P33908 653 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 DENND2CQ68D51 928 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 NLRX1Q86UT6 975 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 CEP57Q86XR8 500 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 ZNF713Q8N859 430 aaPredicted RBP9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 FAM81BQ96LP2 452 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 VPS16Q9H269 839 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 ZNF500O60304 480 aaPredicted RBP9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 UFL1O94874 794 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 HHATQ5VTY9 493 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 NDUFAB1O14561 156 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 NSMCE1Q8WV22 266 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 HYOU1Q9Y4L1 999 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 DNM2P50570 870 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 KLHL30Q0D2K2 578 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 UTP14CQ5TAP6 766 aaKnown RBP9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 GPR108Q9NPR9 543 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 AMFRQ9UKV5 643 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 E7EWF7 191 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 BUB1BO60566 1050 aaPredicted RBP9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 PPFIA3O75145 1194 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 SARNPP82979 210 aaKnown RBP9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 GKAP1Q5VSY0 366 aaPredicted RBP9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 MRFAP1L1Q96HT8 127 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 MYO1AQ9UBC5 1043 aa9.26□□□□□ -0.93
SPTLC3-201ENST00000399002 EFCAB8A8MWE9 144 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 SUCLG2Q96I99 432 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CTTNBP2NLQ9P2B4 639 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 TLDC2A0PJX2 215 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 MAGEA1P43355 309 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 PPARAQ07869 468 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 HACE1Q8IYU2 909 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 ATP2A3Q93084 1043 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 AS3MTQ9HBK9 375 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 GOLGA8QA0A0J9YX86 632 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 GOLGA8OA6NCC3 632 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 SMIM23A6NLE4 172 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 GOLGA8NF8WBI6 632 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CIAO1O76071 339 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 HAUS1Q96CS2 278 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 TBC1D31Q96DN5 1066 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 IQSEC3Q9UPP2 1182 aaPredicted RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC169A6NNP5 214 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 LONP1P36776 959 aaKnown RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC38Q502W7 563 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 MED4Q9NPJ6 270 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 KIF1BO60333 1816 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 H7C1D1 291 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 SEMA3EO15041 775 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 GTPBP6O43824 516 aaPredicted RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 MYL1P05976 194 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 SETSIPP0DME0 302 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CMA1P23946 247 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 AKNAD1Q5T1N1 836 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 PEX26Q7Z412 305 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CSRNP1Q96S65 589 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 ZSWIM6Q9HCJ5 1215 aa9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 CPSF2Q9P2I0 782 aaKnown RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 BZW2Q9Y6E2 419 aaKnown RBP9.25□□□□□ -0.93
SPTLC3-201ENST00000399002 ADCY9O60503 1353 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms