RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 WHAMMP3Q1A5X7 153 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 TMEM139Q8IV31 216 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 MED4Q9NPJ6 270 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 GOLGA8AA7E2F4 631 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 FMNL1O95466 1100 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 IGDCC4Q8TDY8 1250 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 RRP15Q9Y3B9 282 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 RAD21O60216 631 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 CYP2C19P33261 490 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 SMC1AQ14683 1233 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 KIF6Q6ZMV9 814 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 RSRC1Q96IZ7 334 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 BAG1Q99933 345 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 BRIP1Q9BX63 1249 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 PARP3Q9Y6F1 533 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 PRAMEF22A3QJZ6 481 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 ATP5J2-PTCD1G3V325 749 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 PTCD1O75127 700 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 MMP1P03956 469 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 HLTFQ14527 1009 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 RSRC2Q7L4I2 434 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 SLC12A7Q9Y666 1083 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 ANKRD62A6NC57 917 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 HNRNPH2P55795 449 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 REXO1L1PQ8IX06 675 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 METTL24Q5JXM2 366 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 HSD3B7Q9H2F3 369 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 NCOA5Q9HCD5 579 aaKnown RBP6.14□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF804BA4D1E1 1349 aa6.14□□□□□ -1.43
PTPRD-205ENST00000397611 OPA1O60313 960 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 EEF1GP26641 437 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 PLCD1P51178 756 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 RBM28Q9NW13 759 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 CTAGE9A4FU28 777 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 NEFHP12036 1026 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 PAFAH1B1P43034 410 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 COL9A3Q14050 684 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 ARID5BQ14865 1188 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 ZFYVE27Q5T4F4 411 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 WDR93Q6P2C0 686 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 SHC4Q6S5L8 630 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 NLRP10Q86W26 655 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 FNBP4Q8N3X1 1017 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 FANCBQ8NB91 859 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 LRRC2Q9BYS8 371 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 LUC7LQ9NQ29 371 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 FAM217BQ9NTX9 383 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 GNL3LQ9NVN8 582 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 SLC5A1P13866 664 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 PBX1P40424 430 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 PIP4K2BP78356 416 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 PPP2R2CQ9Y2T4 447 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 CLEC4GQ6UXB4 293 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC129Q6ZRS4 1044 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 RPAINQ86UA6 219 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 DGKHQ86XP1 1220 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 A0A1B0GUA9 196 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 WDHD1O75717 1129 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 ATP6V1AP38606 617 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 POSTNQ15063 836 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 RTN1Q16799 776 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 CPSF2Q9P2I0 782 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 LAD1O00515 517 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 PRPF3O43395 683 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 DDAH1O94760 285 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 LIG3P49916 1009 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 CDK17Q00537 523 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 MFSD6Q6ZSS7 791 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 TTLL7Q6ZT98 887 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 POTEDQ86YR6 584 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 GOLGA5Q8TBA6 731 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 CDK5RAP3Q96JB5 506 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 ALS2CR12Q96Q35 445 aa6.13□□□□□ -1.43
PTPRD-205ENST00000397611 ADD3Q9UEY8 706 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 LIMA1Q9UHB6 759 aaKnown RBP6.13□□□□□ -1.43
PTPRD-205ENST00000397611 FRMD3A2A2Y4 597 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 PRPHP41219 470 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CHMP4BP1P59074 171 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 PPARDQ03181 441 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CKAP4Q07065 602 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 TMEM67Q5HYA8 995 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 TC2NQ8N9U0 490 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 STRN4Q9NRL3 753 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SEPT11Q9NVA2 429 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 ADGRG1Q9Y653 693 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 ORC4O43929 436 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 FKBP4Q02790 459 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 LRRC24Q50LG9 513 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SRGAP1Q7Z6B7 1085 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CTCFLQ8NI51 663 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 TMOD3Q9NYL9 352 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 ZAP70P43403 619 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CLCN6P51797 869 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 KCNB1Q14721 858 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms